RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 STX17P56962 302 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 ZC2HC1CQ53FD0 456 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 HAUS6Q7Z4H7 955 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 DHTKD1Q96HY7 919 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 STRA6Q9BX79 667 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 RWDD2AQ9UIY3 292 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 INSL6Q9Y581 213 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 GBF1Q92538 1859 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 EIF3DO15371 548 aaKnown RBP eCLIP23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 ABCD1P33897 745 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 HOXD13P35453 343 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 PMS1P54277 932 aaKnown RBP23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 FAM189BP81408 668 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 MYL5Q02045 173 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 NCAPHQ15003 741 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 BMT2Q1RMZ1 405 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 ECHDC2Q86YB7 292 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 RNF169Q8NCN4 708 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 MRPL4Q9BYD3 311 aaKnown RBP23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 TRIM6Q9C030 488 aaPredicted RBP23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 A0A1B0GUA9 196 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 TRIM49BA6NDI0 452 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 N4BP3O15049 544 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 PRPF6O94906 941 aaKnown RBP23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 KCNA1Q09470 495 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 L1TD1Q5T7N2 865 aaKnown RBP23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 SLC27A1Q6PCB7 646 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 NELFCDQ8IXH7 590 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 ZNF507Q8TCN5 953 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 P2RX5Q93086 422 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 LRCH3Q96II8 777 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 SEMA6BQ9H3T3 888 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 ST6GALNAC4Q9H4F1 302 aa23.27■■□□□ 1.32
R3HDM4-204ENST00000589428 IKBKBO14920 756 aa23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 HTRA4P83105 476 aaPredicted RBP23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 TAS1R3Q7RTX0 852 aa23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 ENOX1Q8TC92 643 aaKnown RBP23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 TIFAQ96CG3 184 aa23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 ADPGKQ9BRR6 497 aa23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 YBX2Q9Y2T7 364 aaKnown RBP23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 PCDHB2Q9Y5E7 798 aa23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 UBE4BO95155 1302 aa23.26■■□□□ 1.31
R3HDM4-204ENST00000589428 ZMYM2Q9UBW7 1377 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 HOXA2O43364 376 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 EOMESO95936 686 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 EDN1P05305 212 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 MYOGP15173 224 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 CCNE1P24864 410 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 ATF7IP2Q5U623 682 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 CENPPQ6IPU0 288 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 STXBP4Q6ZWJ1 553 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 CDR2LQ86X02 465 aaPredicted RBP23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 CRIPAKQ8N1N5 446 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 KCNN1Q92952 543 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 KCTD10Q9H3F6 313 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 TTLL13PA6NNM8 815 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 BECN2A8MW95 431 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 DGKIO75912 1065 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 KIF20AO95235 890 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 CA3P07451 260 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 GTF2BQ00403 316 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 ALCAMQ13740 583 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 UBXN11Q5T124 520 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 TTI2Q6NXR4 508 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 APBB1IPQ7Z5R6 666 aaPredicted RBP23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 HACE1Q8IYU2 909 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 PGBD4Q96DM1 585 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 BICD1Q96G01 975 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 EIF2AQ9BY44 585 aaKnown RBP23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 NKX2-4Q9H2Z4 354 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 PDZD7Q9H5P4 517 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 USP20Q9Y2K6 914 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 PCDHB13Q9Y5F0 798 aa23.25■■□□□ 1.31
R3HDM4-204ENST00000589428 ZNF623O75123 536 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 NPTXRO95502 500 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 ATF7P17544 494 aaPredicted RBP23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 FXR1P51114 621 aaKnown RBP eCLIP23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 ZCWPW2Q504Y3 356 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 PPP2R2DQ66LE6 453 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 ZNF598Q86UK7 904 aaKnown RBP23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 ABI1Q8IZP0 508 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 HSD3B7Q9H2F3 369 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 SLC28A3Q9HAS3 691 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 TBX20Q9UMR3 447 aa23.24■■□□□ 1.31
R3HDM4-204ENST00000589428 KNOP1Q1ED39 458 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 ANKRD40Q6AI12 368 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 HVCN1Q96D96 273 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 ACO2Q99798 780 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 TARS2Q9BW92 718 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 IKZF4Q9H2S9 585 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 RC3H2Q9HBD1 1191 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 TNFSF13BQ9Y275 285 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 NFE2L3Q9Y4A8 694 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 IPPQ9Y573 584 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 COL4A6Q14031 1691 aa23.23■■□□□ 1.31
R3HDM4-204ENST00000589428 TMEM265A0A087WTH1 108 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 BICDL2A1A5D9 508 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 LCHNA4D1U4 455 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 SMTNL1A8MU46 457 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms