RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SALL4Q9UJQ4 1053 aa15.89■□□□□ 0.13
CCDC43-203ENST00000588210 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
CCDC43-203ENST00000588210 PCDHA2Q9Y5H9 948 aa15.89■□□□□ 0.13
CCDC43-203ENST00000588210 NOL4O94818 638 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 CD4P01730 458 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 CLTBP09497 229 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 CCDC181Q5TID7 509 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 KLHDC7AQ5VTJ3 777 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 SFMBT2Q5VUG0 894 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 SRLQ86TD4 932 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 CCDC60Q8IWA6 550 aaPredicted RBP15.88■□□□□ 0.13
CCDC43-203ENST00000588210 TRIM59Q8IWR1 403 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 CCDC65Q8IXS2 484 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 TLR10Q9BXR5 811 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
CCDC43-203ENST00000588210 MAFBQ9Y5Q3 323 aaPredicted RBP15.88■□□□□ 0.13
CCDC43-203ENST00000588210 GOLGA6BA6NDN3 693 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 B4GALT4O60513 344 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 PAFAH1B1P43034 410 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 SLC20A2Q08357 652 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 TDRD12Q587J7 1177 aaKnown RBP15.88■□□□□ 0.13
CCDC43-203ENST00000588210 HAUS3Q68CZ6 603 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 GDAP1L1Q96MZ0 367 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
CCDC43-203ENST00000588210 RNPEPQ9H4A4 650 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 RNF14Q9UBS8 474 aa15.88■□□□□ 0.13
CCDC43-203ENST00000588210 DMGDHQ9UI17 866 aaKnown RBP15.88■□□□□ 0.13
CCDC43-203ENST00000588210 SMIM10L2AP0DMW4 78 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 SMIM10L2BP0DMW5 78 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 MARK3P27448 753 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 SPIRE1Q08AE8 756 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 EMBQ6PCB8 327 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 LRRC31Q6UY01 552 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 PPP1R13LQ8WUF5 828 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 HDAC7Q8WUI4 952 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 PDLIM7Q9NR12 457 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 STIM2Q9P246 746 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 GABBR1Q9UBS5 961 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 PRKAG2Q9UGJ0 569 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 FRMD3A2A2Y4 597 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 NCK2O43639 380 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 SHOX2O60902 331 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 PLA2G4BP0C869 781 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 EPHB4P54760 987 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 GLE1Q53GS7 698 aaKnown RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 GDF6Q6KF10 455 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 RIN2Q8WYP3 895 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 FGFBP2Q9BYJ0 223 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 TRPV6Q9H1D0 765 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 KCTD10Q9H3F6 313 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 NLRC4Q9NPP4 1024 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 TRMT13Q9NUP7 481 aaKnown RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 TMEM39AQ9NV64 488 aa15.87■□□□□ 0.13
CCDC43-203ENST00000588210 FEZ2Q9UHY8 353 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 RRP15Q9Y3B9 282 aaKnown RBP15.87■□□□□ 0.13
CCDC43-203ENST00000588210 NRCAMQ92823 1304 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 TNRC18O15417 2968 aaPredicted RBP15.86■□□□□ 0.13
CCDC43-203ENST00000588210 C17orf102A2RUQ5 167 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 GNAT1P11488 350 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 HOXC8P31273 242 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 PLCB4Q15147 1175 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 EPHA7Q15375 998 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 PTGISQ16647 500 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 CAVIN3Q969G5 261 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.86■□□□□ 0.13
CCDC43-203ENST00000588210 IGSF9BQ9UPX0 1349 aa15.86■□□□□ 0.13
CCDC43-203ENST00000588210 POTEB3A0JP26 581 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 E9PMD0 336 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 MYO1CO00159 1063 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 EML1O00423 815 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 KIAA0355O15063 1070 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 SSBP05455 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC43-203ENST00000588210 CXCR5P32302 372 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 NNTQ13423 1086 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 NAB2Q15742 525 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 SLC18A3Q16572 532 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 EDRF1Q3B7T1 1238 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 CFAP221Q4G0U5 840 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 C8orf74Q6P047 294 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 POTEBQ6S5H4 581 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 GPBP1Q86WP2 473 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 GPIHBP1Q8IV16 184 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 FAM76AQ8TAV0 307 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 SCFD1Q8WVM8 642 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 ATP6V0A1Q93050 837 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 SH3GL2Q99962 352 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 PRDM5Q9NQX1 630 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-203ENST00000588210 EHD2Q9NZN4 543 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 KIAA1024Q9UPX6 916 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 NOD1Q9Y239 953 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 BUB1O43683 1085 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 HBP1O60381 514 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 CLSTN1O94985 981 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 CYP11B2P19099 503 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 POLR2FP61218 127 aaKnown RBP15.85■□□□□ 0.13
CCDC43-203ENST00000588210 ATP8B4Q8TF62 1192 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms