RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KCNA5P22460 613 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 CA8P35219 290 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 STAT6P42226 847 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 SLC11A1P49279 550 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 HYAL1Q12794 435 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 ZNF568Q3ZCX4 644 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 IGFLR1Q9H665 355 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 PARVGQ9HBI0 331 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 KLK14Q9P0G3 267 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 TNFSF13BQ9Y275 285 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 MYH11P35749 1972 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 REV3LO60673 3130 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 INPPL1O15357 1258 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 NCK2O43639 380 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 RECQL4O94761 1208 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 DDHD2O94830 711 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 GALTP07902 379 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 DDIT3P35638 169 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 NRIP1P48552 1158 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 ERVFC1P60507 584 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 PDE12Q6L8Q7 609 aaKnown RBP16.28■□□□□ 0.2
ATG4D-207ENST00000587256 TAS1R3Q7RTX0 852 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 ADGRD2Q7Z7M1 963 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 TMEM173Q86WV6 379 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-207ENST00000587256 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 PDILTQ8N807 584 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 TMEM161BQ8NDZ6 487 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 PABPC5Q96DU9 382 aaKnown RBP16.28■□□□□ 0.2
ATG4D-207ENST00000587256 IGSF21Q96ID5 467 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 TMEM175Q9BSA9 504 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 TARS2Q9BW92 718 aaKnown RBP16.28■□□□□ 0.2
ATG4D-207ENST00000587256 SNTG2Q9NY99 539 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
ATG4D-207ENST00000587256 PRG3Q9Y2Y8 225 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-207ENST00000587256 FSCN2O14926 492 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 CUTAO60888 179 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 NR1I2O75469 434 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 MAPTP10636 758 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 HARSP12081 509 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 OR1G1P47890 313 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 ME1P48163 572 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 KCNQ1P51787 676 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 NCKAP1LP55160 1127 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 GRIK3Q13003 919 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 GIT2Q14161 759 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 ATL3Q6DD88 541 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 SV2BQ7L1I2 683 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 RBM23Q86U06 439 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 BCL7CQ8WUZ0 217 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 BICD1Q96G01 975 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 ACO2Q99798 780 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 NTPCRQ9BSD7 190 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 CDT1Q9H211 546 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 TLE6Q9H808 572 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.2
ATG4D-207ENST00000587256 CFAP45Q9UL16 551 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.2
ATG4D-207ENST00000587256 H3BQ06 376 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-207ENST00000587256 BRD1O95696 1058 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATG4D-207ENST00000587256 ZNF131P52739 623 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
ATG4D-207ENST00000587256 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
ATG4D-207ENST00000587256 DYMQ7RTS9 669 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 HAUS6Q7Z4H7 955 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 ZBTB33Q86T24 672 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
ATG4D-207ENST00000587256 A0A087X0B3 334 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 NRP1O14786 923 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 TRAK2O60296 914 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 ALDH2P05091 517 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 MCF2P10911 925 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 SCP2P22307 547 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 MATR3P43243 847 aaKnown RBP eCLIP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 NDUFV1P49821 464 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 YARSP54577 528 aaKnown RBP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 DSC1Q08554 894 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 COL19A1Q14993 1142 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 MPZL3Q6UWV2 235 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 COLGALT2Q8IYK4 626 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 COL25A1Q9BXS0 654 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 TOPORSQ9NS56 1045 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 MIOSQ9NXC5 875 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 CUL9Q8IWT3 2517 aa16.25■□□□□ 0.19
ATG4D-207ENST00000587256 TDRD15B5MCY1 1934 aaKnown RBP16.25■□□□□ 0.19
ATG4D-207ENST00000587256 SPTBN5Q9NRC6 3674 aaKnown RBP16.24■□□□□ 0.19
ATG4D-207ENST00000587256 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-207ENST00000587256 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms