RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 RXFP1Q9HBX9 757 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 GPRC5CQ9NQ84 441 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
LIG3-207ENST00000586119 DUSP12Q9UNI6 340 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
LIG3-207ENST00000586119 VPS13AQ96RL7 3174 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 NPTXRO95502 500 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 URODP06132 367 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
LIG3-207ENST00000586119 AOC1P19801 751 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 IGFBP6P24592 240 aaPredicted RBP12.93□□□□□ -0.34
LIG3-207ENST00000586119 GLUD2P49448 558 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 DSG1Q02413 1049 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 C15orf39Q6ZRI6 1047 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 SMG7Q92540 1137 aaKnown RBP12.93□□□□□ -0.34
LIG3-207ENST00000586119 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
LIG3-207ENST00000586119 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 SPTBN4Q9H254 2564 aa12.93□□□□□ -0.34
LIG3-207ENST00000586119 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 CARNS1A5YM72 827 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 BTBD18B2RXH4 712 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 TGM5O43548 720 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 GAS2O43903 313 aaKnown RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 BAG4O95429 457 aaKnown RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 GLUD1P00367 558 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 ADH1AP07327 375 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 AXLP30530 894 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 TXKP42681 527 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 LILRA6Q6PI73 481 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 PRSS55Q6UWB4 352 aaPredicted RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 SLFN12Q8IYM2 578 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 SLC44A3Q8N4M1 653 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 HASPINQ8TF76 798 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 COLEC11Q9BWP8 271 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 NT5C3AQ9H0P0 336 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 TMEM60Q9H2L4 133 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
LIG3-207ENST00000586119 POLD4Q9HCU8 107 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 UBN1Q9NPG3 1134 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 PARP2Q9UGN5 583 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 CA14Q9ULX7 337 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 PCDHA12Q9UN75 941 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 CACNA1IQ9P0X4 2223 aa12.92□□□□□ -0.34
LIG3-207ENST00000586119 STK25O00506 426 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 EPB41L2O43491 1005 aaKnown RBP12.91□□□□□ -0.34
LIG3-207ENST00000586119 JAK2O60674 1132 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
LIG3-207ENST00000586119 CDKL5O76039 1030 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 KRT2P35908 639 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 RARRES1P49788 294 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 NTHL1P78549 312 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 MXD4Q14582 209 aaPredicted RBP12.91□□□□□ -0.34
LIG3-207ENST00000586119 ME3Q16798 604 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 FUT10Q6P4F1 479 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 DTWD2Q8NBA8 298 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 RIN2Q8WYP3 895 aaPredicted RBP12.91□□□□□ -0.34
LIG3-207ENST00000586119 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
LIG3-207ENST00000586119 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 COL4A3Q01955 1670 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 VWA8A3KMH1 1905 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
LIG3-207ENST00000586119 CLUHO75153 1309 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 A0A1B0GUA9 196 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 POTEMA6NI47 508 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 ADAM12O43184 909 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
LIG3-207ENST00000586119 DGAT1O75907 488 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 LYPLA2O95372 231 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 EDN1P05305 212 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 XBP1P17861 261 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 ATP2B1P20020 1258 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 POU5F1BQ06416 359 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 TFDP1Q14186 410 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 ANGPT1Q15389 498 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 CALCRLQ16602 461 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
LIG3-207ENST00000586119 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 ADSSL1Q8N142 457 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 NKD2Q969F2 451 aaPredicted RBP12.9□□□□□ -0.34
LIG3-207ENST00000586119 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
LIG3-207ENST00000586119 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms