RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 A1CFQ9NQ94 594 aaKnown RBP12.14□□□□□ -0.47
TOP3A-217ENST00000584582 NRBP2Q9NSY0 501 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 FBXO40Q9UH90 709 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 RAB21Q9UL25 225 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 PCDHA2Q9Y5H9 948 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 EIF3DO15371 548 aaKnown RBP eCLIP12.13□□□□□ -0.47
TOP3A-217ENST00000584582 ADRB2P07550 413 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 SEC24CP53992 1094 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 CDK17Q00537 523 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 LIN9Q5TKA1 542 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 SV2AQ7L0J3 742 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 CPNE8Q86YQ8 564 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 LNX1Q8TBB1 728 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-217ENST00000584582 KRT35Q92764 455 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 ZNF148Q9UQR1 794 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.13□□□□□ -0.47
TOP3A-217ENST00000584582 GJB1P08034 283 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-217ENST00000584582 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 GJC2Q5T442 439 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-217ENST00000584582 SCYL2Q6P3W7 929 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 OTUD6BQ8N6M0 293 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 ADAM22Q9P0K1 906 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 PRDM4Q9UKN5 801 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 FGFR4P22455 802 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 HYIQ5T013 277 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 MEI1Q5TIA1 1274 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 C18orf8Q96DM3 657 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
TOP3A-217ENST00000584582 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-217ENST00000584582 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
TOP3A-217ENST00000584582 NR1D1P20393 614 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 SFNP31947 248 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 STAT5BP51692 787 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 EMC2Q15006 297 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 ANO5Q75V66 913 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 DAW1Q8N136 415 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 HNRNPLLQ8WVV9 542 aaKnown RBP12.12□□□□□ -0.47
TOP3A-217ENST00000584582 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 RGS16O15492 202 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-217ENST00000584582 PTPRAP18433 802 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 SCP2P22307 547 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
TOP3A-217ENST00000584582 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 THOC1Q96FV9 657 aaKnown RBP12.12□□□□□ -0.47
TOP3A-217ENST00000584582 CAMKK2Q96RR4 588 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 PSMD1Q99460 953 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 LRP5O75197 1615 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 IGSF9BQ9UPX0 1349 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 PIK3CDO00329 1044 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 TMEM132BQ14DG7 1078 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 GPR162Q16538 588 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 PCNX4Q63HM2 1172 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 ZBTB8OSQ8IWT0 167 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 MMGT1Q8N4V1 131 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 CYP26B1Q9NR63 512 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
TOP3A-217ENST00000584582 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 PPP2R5AQ15172 486 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 CDO1Q16878 200 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 CDHR1Q96JP9 859 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 PCSK1NQ9UHG2 260 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 RRP15Q9Y3B9 282 aaKnown RBP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 NR2E1Q9Y466 385 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 VGLL3A8MV65 326 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 GOLGA8KD6RF30 607 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 DGAT1O75907 488 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 HLA-DRAP01903 254 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 MAGOHP61326 146 aaKnown RBP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 IFT88Q13099 833 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-217ENST00000584582 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 LTBP4Q8N2S1 1624 aa12.11□□□□□ -0.47
TOP3A-217ENST00000584582 MAP2K7O14733 419 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 GUCY2CP25092 1073 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 GNA15P30679 374 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 HNRNPH3P31942 346 aaKnown RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 PPATQ06203 517 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms