RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ACADSP16219 412 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 KRT76Q01546 638 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ZC3H12BQ5HYM0 836 aaKnown RBP13.8□□□□□ -0.2
RNF43-208ENST00000584437 RFX8Q6ZV50 586 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 PDP2Q9P2J9 529 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
RNF43-208ENST00000584437 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 EIF2AK2P19525 551 aaKnown RBP13.8□□□□□ -0.2
RNF43-208ENST00000584437 OSBPP22059 807 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 AP3M2P53677 418 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ALDH18A1P54886 795 aaKnown RBP13.8□□□□□ -0.2
RNF43-208ENST00000584437 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 RHPN2Q8IUC4 686 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 SERPINB9P50453 376 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 NSUN2Q08J23 767 aaKnown RBP eCLIP13.8□□□□□ -0.2
RNF43-208ENST00000584437 C16orf89Q6UX73 402 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ARL8AQ96BM9 186 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
RNF43-208ENST00000584437 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 MAPK6Q16659 721 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 RCOR2Q8IZ40 523 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 FAM213AQ9BRX8 229 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 A0A1W2PQJ5 194 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 STX3Q13277 289 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 PDIA5Q14554 519 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 TBCCQ15814 346 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 RNF217Q8TC41 542 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 RBM15Q96T37 977 aaKnown RBP eCLIP13.79□□□□□ -0.21e-7■■■□□ 15.6
RNF43-208ENST00000584437 NPHS2Q9NP85 383 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 PCSK1NQ9UHG2 260 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 GGT7Q9UJ14 662 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 DISP1Q96F81 1524 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 SMAPO00193 183 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 SFNP31947 248 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 CRYMQ14894 314 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
RNF43-208ENST00000584437 USP17L5A8MUK1 530 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 AP3B1O00203 1094 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 P4HBP07237 508 aaKnown RBP13.79□□□□□ -0.2
RNF43-208ENST00000584437 CDH2P19022 906 aaPredicted RBP13.79□□□□□ -0.2
RNF43-208ENST00000584437 VHLP40337 213 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 FXR1P51114 621 aaKnown RBP eCLIP13.79□□□□□ -0.2
RNF43-208ENST00000584437 MS4A14Q96JA4 679 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 AP5M1Q9H0R1 490 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 E7ENQ6 273 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 SPAG6O75602 509 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 MTMR1Q13613 665 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 RAD9BQ6WBX8 426 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 STK33Q9BYT3 514 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 L2HGDHQ9H9P8 463 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 KIF9Q9HAQ2 790 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 NDUFA13Q9P0J0 144 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 ZFATQ9P243 1243 aa13.79□□□□□ -0.2
RNF43-208ENST00000584437 SLC16A4O15374 487 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 SERPINB3P29508 390 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 EXOSC10Q01780 885 aaKnown RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 DPYDQ12882 1025 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 FASTKD1Q53R41 847 aaKnown RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 DSTYKQ6XUX3 929 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 CATSPER3Q86XQ3 398 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 ZNF555Q8NEP9 628 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 RIN2Q8WYP3 895 aaPredicted RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 IFT43Q96FT9 208 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 LMTK3Q96Q04 1460 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 DENND3A2RUS2 1198 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 KRT16P08779 473 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 FCER1AP12319 257 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 TMED10P49755 219 aaKnown RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 GPC3P51654 580 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 USP11P51784 963 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 FMR1Q06787 632 aaKnown RBP eCLIP13.78□□□□□ -0.2
RNF43-208ENST00000584437 KDM7AQ6ZMT4 941 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 ADCK1Q86TW2 530 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 EME1Q96AY2 570 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 NLRP4Q96MN2 994 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 TRIM45Q9H8W5 580 aaPredicted RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 SCP2P22307 547 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 ACTR2P61160 394 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 PRUNE1Q86TP1 453 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 TEX2Q8IWB9 1127 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 NOD2Q9HC29 1040 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 EMSYQ7Z589 1322 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 ANGPT2O15123 496 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 SLC26A4O43511 780 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 RHOBTB3O94955 611 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 NAB2Q15742 525 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms