RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 GIMAP4Q9NUV9 329 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 AOX1Q06278 1338 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 SUPT3HO75486 399 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 KRT4P19013 534 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 CDK17Q00537 523 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 C6orf10Q5SRN2 563 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 SH3TC2Q8TF17 1288 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 CLMNQ96JQ2 1002 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 PITPNM3Q9BZ71 974 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
MSI2-217ENST00000583705 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 FKBP9O95302 570 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 CDC16Q13042 620 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 MED21Q13503 144 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 MTMR2Q13614 643 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 FKBP9P1Q75LS8 142 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 NSUN6Q8TEA1 469 aaKnown RBP11.94□□□□□ -0.5
MSI2-217ENST00000583705 BCL2L14Q9BZR8 327 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ZNF229Q9UJW7 825 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 CAPN1P07384 714 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 DDX42Q86XP3 938 aaKnown RBP eCLIP11.94□□□□□ -0.5
MSI2-217ENST00000583705 RNF149Q8NC42 400 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 PBKQ96KB5 322 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 PALMDQ9NP74 551 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 IQCA1LA6NCM1 817 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 NDUFS3O75489 264 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ENDOD1O94919 500 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 MLNP12872 115 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 DIS3LQ8TF46 1054 aaKnown RBP11.94□□□□□ -0.5
MSI2-217ENST00000583705 MAGED4Q96JG8 741 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ATP6V1C1P21283 382 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 SESN2P58004 480 aaPredicted RBP11.94□□□□□ -0.5
MSI2-217ENST00000583705 IRAK1BP1Q5VVH5 260 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 FOXR1Q6PIV2 292 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ASZ1Q8WWH4 475 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 FOXP1Q9H334 677 aaPredicted RBP11.94□□□□□ -0.5
MSI2-217ENST00000583705 NDE1Q9NXR1 346 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
MSI2-217ENST00000583705 BLMP54132 1417 aaPredicted RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 ZRANB3Q5FWF4 1079 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 PTRHD1Q6GMV3 140 aaKnown RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 RD3Q7Z3Z2 195 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 STKLD1Q8NE28 680 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 PPP1R2P3Q6NXS1 205 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 BTNL9Q6UXG8 535 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 TRIM69Q86WT6 500 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ANKMY2Q8IV38 441 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
MSI2-217ENST00000583705 RBAKQ9NYW8 714 aaPredicted RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 ADAMTS1Q9UHI8 967 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 GOLGA8RI6L899 631 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 KCNN4O15554 427 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 NMT2O60551 498 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CDH6P55285 790 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 NNTQ13423 1086 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ARHGAP15Q53QZ3 475 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 NT5DC4Q86YG4 428 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ZNF556Q9HAH1 456 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CAB39Q9Y376 341 aaPredicted RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 POLRMTO00411 1230 aaKnown RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 GRAP2O75791 330 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ADD2P35612 726 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 PLIN5Q00G26 463 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ARHGEF25Q86VW2 580 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CACUL1Q86Y37 369 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 KRT78Q8N1N4 520 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 GPR63Q9BZJ6 419 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 NFU1Q9UMS0 254 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 LZTS1Q9Y250 596 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 CUL7Q14999 1698 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 HAUS6Q7Z4H7 955 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 IL1RL2Q9HB29 575 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 RASGRF1Q13972 1273 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 SPARCL1Q14515 664 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 COMMD2Q86X83 199 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 C17orf80Q9BSJ5 609 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 STN1Q9H668 368 aaKnown RBP11.93□□□□□ -0.5
MSI2-217ENST00000583705 FBXO40Q9UH90 709 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 SNX24Q9Y343 169 aa11.93□□□□□ -0.5
MSI2-217ENST00000583705 MLH3Q9UHC1 1453 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms