RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 EXOC7Q9UPT5 735 aa11.77□□□□□ -0.53
NUP85-220ENST00000583070 STYXL1Q9Y6J8 313 aa11.77□□□□□ -0.53
NUP85-220ENST00000583070 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
NUP85-220ENST00000583070 CLDN3O15551 220 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 DNAJB2P25686 324 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 MCM4P33991 863 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 HOXD13P35453 343 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 LIG4P49917 911 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 STK4Q13043 487 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 NOLC1Q14978 699 aaKnown RBP eCLIP11.76□□□□□ -0.53
NUP85-220ENST00000583070 CLLU1OSQ5K130 101 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 FAM117BQ6P1L5 589 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 CMTR2Q8IYT2 770 aaKnown RBP11.76□□□□□ -0.53
NUP85-220ENST00000583070 HACE1Q8IYU2 909 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 SCFD1Q8WVM8 642 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 BICD1Q96G01 975 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 ZBTB45Q96K62 511 aaPredicted RBP11.76□□□□□ -0.53
NUP85-220ENST00000583070 YME1L1Q96TA2 773 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 ZBED2Q9BTP6 218 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 GTPBP4Q9BZE4 634 aaKnown RBP11.76□□□□□ -0.53
NUP85-220ENST00000583070 HAPLN2Q9GZV7 340 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 TMEM117Q9H0C3 514 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 NXF3Q9H4D5 531 aaKnown RBP11.76□□□□□ -0.53
NUP85-220ENST00000583070 TMEM206Q9H813 350 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 SLC39A2Q9NP94 309 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 UBN1Q9NPG3 1134 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 RMND1Q9NWS8 449 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 MSRAQ9UJ68 235 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 YBX2Q9Y2T7 364 aaKnown RBP11.76□□□□□ -0.53
NUP85-220ENST00000583070 PCDHA5Q9Y5H7 936 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 MYO7AQ13402 2215 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 PLXNA4Q9HCM2 1894 aa11.76□□□□□ -0.53
NUP85-220ENST00000583070 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 A0A0B4J269 797 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 MEIS3P2A8K0S8 358 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 SOX1O00570 391 aaPredicted RBP11.75□□□□□ -0.53
NUP85-220ENST00000583070 FAM189A1O60320 539 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 PRPF6O94906 941 aaKnown RBP11.75□□□□□ -0.53
NUP85-220ENST00000583070 MBD3O95983 291 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 FGFR1P11362 822 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 ITGA4P13612 1032 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 PBX2P40425 430 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 RABGGTBP53611 331 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 SLFN12LQ6IEE8 588 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 GPT2Q8TD30 523 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 LPPQ93052 612 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 SMARCE1Q969G3 411 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 CASD1Q96PB1 797 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 TCHPQ9BT92 498 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 RSAD1Q9HA92 442 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 ANKFY1Q9P2R3 1169 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 GIT1Q9Y2X7 761 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 HES2Q9Y543 173 aa11.75□□□□□ -0.53
NUP85-220ENST00000583070 LCHNA4D1U4 455 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 TISP43B9A030 160 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 ANKRD63C9JTQ0 380 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 OGTO15294 1046 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 CA3P07451 260 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 LINC00271P0C7V0 271 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 MYOGP15173 224 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 GARTP22102 1010 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 ADSSP30520 456 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 GRM5P41594 1212 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 GATMP50440 423 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 SNRPFP62306 86 aaKnown RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 KYAT1Q16773 422 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 KNOP1Q1ED39 458 aaKnown RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 GLB1LQ6UWU2 654 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 SYCP3Q8IZU3 236 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 GUF1Q8N442 669 aaKnown RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 CEP120Q8N960 986 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 RNF169Q8NCN4 708 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 HELQQ8TDG4 1101 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 TMEM174Q8WUU8 243 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 ERCC4Q92889 916 aaPredicted RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 CLP1Q92989 425 aaKnown RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 MRPL9Q9BYD2 267 aaKnown RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 GBP3Q9H0R5 595 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 IKZF4Q9H2S9 585 aa11.74□□□□□ -0.53
NUP85-220ENST00000583070 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
NUP85-220ENST00000583070 LINC01553A4QN01 128 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 TBKBP1A7MCY6 615 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
NUP85-220ENST00000583070 TGFB1I1O43294 461 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 OFD1O75665 1012 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 RECQL4O94761 1208 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 KIF20AO95235 890 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 POU5F1Q01860 360 aaKnown RBP11.73□□□□□ -0.53
NUP85-220ENST00000583070 BTG3Q14201 252 aaPredicted RBP11.73□□□□□ -0.53
NUP85-220ENST00000583070 CAMK4Q16566 473 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 NOMO2Q5JPE7 1267 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 ZNF658Q5TYW1 1059 aaPredicted RBP11.73□□□□□ -0.53
NUP85-220ENST00000583070 ZBTB33Q86T24 672 aa11.73□□□□□ -0.53
NUP85-220ENST00000583070 ABI1Q8IZP0 508 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms