RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 ANGPT1Q15389 498 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 USP41Q3LFD5 358 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 SLC27A1Q6PCB7 646 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 TAS1R1Q7RTX1 841 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 TPH2Q8IWU9 490 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 WASF1Q92558 559 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 CPB2Q96IY4 423 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 ZFP42Q96MM3 310 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 CCDC43Q96MW1 224 aaKnown RBP11.43□□□□□ -0.58
GGA3-210ENST00000580799 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
GGA3-210ENST00000580799 RNF39Q9H2S5 420 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 SEMA4AQ9H3S1 761 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 PIDD1Q9HB75 910 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 FNIP2Q9P278 1114 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 PCDHA12Q9UN75 941 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 HES2Q9Y543 173 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 MYO15AQ9UKN7 3530 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
GGA3-210ENST00000580799 PFKFB2O60825 505 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 RFPL2O75678 378 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 CFHP08603 1231 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 SRFP11831 508 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 ARF4P18085 180 aaPredicted RBP11.42□□□□□ -0.58
GGA3-210ENST00000580799 RFX1P22670 979 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 SCRN1Q12765 414 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 CAPSQ13938 189 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 AMHR2Q16671 573 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 ERMP1Q7Z2K6 904 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 SLC44A3Q8N4M1 653 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 ZNF707Q96C28 371 aaPredicted RBP11.42□□□□□ -0.58
GGA3-210ENST00000580799 HSD17B14Q9BPX1 270 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 EIF2AK1Q9BQI3 630 aaKnown RBP11.42□□□□□ -0.58
GGA3-210ENST00000580799 NT5C3AQ9H0P0 336 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
GGA3-210ENST00000580799 BRMS1Q9HCU9 246 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 MIOSQ9NXC5 875 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 ADAM28Q9UKQ2 775 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 ZFP37Q9Y6Q3 630 aaPredicted RBP11.42□□□□□ -0.58
GGA3-210ENST00000580799 SPTBN4Q9H254 2564 aa11.42□□□□□ -0.58
GGA3-210ENST00000580799 SF3B1O75533 1304 aaKnown RBP eCLIP11.41□□□□□ -0.58
GGA3-210ENST00000580799 A0A1B0GUA9 196 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 F8W810 466 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 STK25O00506 426 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 TGM5O43548 720 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 NARSO43776 548 aaKnown RBP11.41□□□□□ -0.58
GGA3-210ENST00000580799 SPATA31D3P0C874 917 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 XRCC6P12956 609 aaKnown RBP eCLIP11.41□□□□□ -0.58
GGA3-210ENST00000580799 LAMP2P13473 410 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 KRT2P35908 639 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 ARL2P36404 184 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 LILRA6Q6PI73 481 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 SPATA31D4Q6ZUB0 917 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 PALB2Q86YC2 1186 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 GSTCDQ8NEC7 633 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 RSAD2Q8WXG1 361 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 RIN2Q8WYP3 895 aaPredicted RBP11.41□□□□□ -0.58
GGA3-210ENST00000580799 PRIMPOLQ96LW4 560 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 MYADMQ96S97 322 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 APOL6Q9BWW8 343 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 GPR62Q9BZJ7 368 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 GJB4Q9NTQ9 266 aa11.41□□□□□ -0.58
GGA3-210ENST00000580799 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
GGA3-210ENST00000580799 KRBA1A5PL33 1030 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 ANHXE9PGG2 379 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 TADA2AO75478 443 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 ZMYND10O75800 440 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 GLRA2P23416 452 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 RARRES1P49788 294 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 HTR4Q13639 388 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 HSP90AA2PQ14568 343 aaPredicted RBP11.4□□□□□ -0.58
GGA3-210ENST00000580799 ANKRD1Q15327 319 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 CALCRLQ16602 461 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 EARS2Q5JPH6 523 aaKnown RBP11.4□□□□□ -0.58
GGA3-210ENST00000580799 PHLDB3Q6NSJ2 640 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 ASAP3Q8TDY4 903 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 TNFRSF25Q93038 417 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 B3GALT6Q96L58 329 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 TTC12Q9H892 705 aaPredicted RBP11.4□□□□□ -0.58
GGA3-210ENST00000580799 TBC1D17Q9HA65 648 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 SLC2A4RGQ9NR83 387 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 ORC3Q9UBD5 711 aaPredicted RBP11.4□□□□□ -0.58
GGA3-210ENST00000580799 CA14Q9ULX7 337 aa11.4□□□□□ -0.58
GGA3-210ENST00000580799 DOCK8Q8NF50 2099 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 B4GALT5O43286 388 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 NEMFO60524 1076 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 NPTXRO95502 500 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
GGA3-210ENST00000580799 MYBP10242 640 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 AKAP5P24588 427 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 ID4P47928 161 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 NR5A1Q13285 461 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 TUSC3Q13454 348 aa11.39□□□□□ -0.59
GGA3-210ENST00000580799 RIF1Q5UIP0 2472 aaKnown RBP11.39□□□□□ -0.59
GGA3-210ENST00000580799 PDXDC1Q6P996 788 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms