RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ENPP3O14638 875 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 OGTO15294 1046 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 TGFB1I1O43294 461 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 ZNF623O75123 536 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 GNA14O95837 355 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 STAG3L1P0CL83 205 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
SKA2-205ENST00000580541 SYN1P17600 705 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 YARSP54577 528 aaKnown RBP15.59■□□□□ 0.09
SKA2-205ENST00000580541 ZNF445P59923 1031 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 DSC3Q14574 896 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 ANKRD40Q6AI12 368 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 ZBTB33Q86T24 672 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 XXYLT1Q8NBI6 393 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 NOC3LQ8WTT2 800 aaKnown RBP15.59■□□□□ 0.09
SKA2-205ENST00000580541 CEP63Q96MT8 703 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 BPIFA3Q9BQP9 254 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 TSPY26PQ9H489 355 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 FAM105AQ9NUU6 356 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 CTNND2Q9UQB3 1225 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 TANC1Q9C0D5 1861 aa15.59■□□□□ 0.09
SKA2-205ENST00000580541 ZNF233A6NK53 670 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 BECN2A8MW95 431 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 CLIC2O15247 247 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 EXTL3O43909 919 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 EXOC3O60645 756 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 NPTXRO95502 500 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 AMHP03971 560 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 NR3C1P04150 777 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 CLTAP09496 248 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 NR2F2P24468 414 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 KCNJ6P48051 423 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 ZNF165P49910 485 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 TPM4P67936 248 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 ANO6Q4KMQ2 910 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 FAM114A1Q8IWE2 563 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 GPD1LQ8N335 351 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 ENOX1Q8TC92 643 aaKnown RBP15.58■□□□□ 0.08
SKA2-205ENST00000580541 ACAP3Q96P50 834 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 TSPAN18Q96SJ8 248 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 DNAJC25Q9H1X3 360 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 TMX1Q9H3N1 280 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 ELAC1Q9H777 363 aaKnown RBP15.58■□□□□ 0.08
SKA2-205ENST00000580541 TOPORSQ9NS56 1045 aaPredicted RBP15.58■□□□□ 0.08
SKA2-205ENST00000580541 HSPBP1Q9NZL4 362 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 LRFN2Q9ULH4 789 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 PCDHB7Q9Y5E2 793 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 PCDHB2Q9Y5E7 798 aa15.58■□□□□ 0.08
SKA2-205ENST00000580541 SIP14410 1827 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 MAPK13O15264 365 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 HOXA2O43364 376 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 ITGA4P13612 1032 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 ADSSP30520 456 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 PSMC2P35998 433 aaKnown RBP15.57■□□□□ 0.08
SKA2-205ENST00000580541 GRM5P41594 1212 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 CYP2J2P51589 502 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 FAM189BP81408 668 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 SURF1Q15526 300 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 SPATA1Q5VX52 437 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 FILIP1Q7Z7B0 1213 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 MRPL10Q7Z7H8 261 aaKnown RBP15.57■□□□□ 0.08
SKA2-205ENST00000580541 CD302Q8IX05 232 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 ZBTB45Q96K62 511 aaPredicted RBP15.57■□□□□ 0.08
SKA2-205ENST00000580541 FUCA2Q9BTY2 467 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 MKNK1Q9BUB5 465 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 CDT1Q9H211 546 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 PCIF1Q9H4Z3 704 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 RPF1Q9H9Y2 349 aaKnown RBP15.57■□□□□ 0.08
SKA2-205ENST00000580541 PLEKHA5Q9HAU0 1116 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 DMAC2Q9NW81 257 aa15.57■□□□□ 0.08
SKA2-205ENST00000580541 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.57■□□□□ 0.08
SKA2-205ENST00000580541 SCN5AQ14524 2016 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 TET1Q8NFU7 2136 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 MKI67P46013 3256 aaKnown RBP15.56■□□□□ 0.08
SKA2-205ENST00000580541 TTLL13PA6NNM8 815 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 C9IYK1 514 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 CAPN15O75808 1086 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 ACRP10323 421 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 EPB41P11171 864 aaKnown RBP15.56■□□□□ 0.08
SKA2-205ENST00000580541 HARSP12081 509 aaKnown RBP15.56■□□□□ 0.08
SKA2-205ENST00000580541 PRKCSHP14314 528 aaPredicted RBP15.56■□□□□ 0.08
SKA2-205ENST00000580541 STX17P56962 302 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 MYL5Q02045 173 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 MLLT1Q03111 559 aaPredicted RBP15.56■□□□□ 0.08
SKA2-205ENST00000580541 ZCWPW2Q504Y3 356 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 EEF1DP3Q658K8 133 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 CEP135Q66GS9 1140 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 TTI2Q6NXR4 508 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 ZNF365Q70YC5 407 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 ECHDC2Q86YB7 292 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 THNSL1Q8IYQ7 743 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 ANKRD20A12PQ8NF67 263 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 CBWD1Q9BRT8 395 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 METTL14Q9HCE5 456 aaKnown RBP15.56■□□□□ 0.08
SKA2-205ENST00000580541 TMEM161AQ9NX61 479 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 MAGEC2Q9UBF1 373 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms