RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 RGS20O76081 388 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 FSBPO95073 299 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 TNNC1P63316 161 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SLC7A5Q01650 507 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SNRNP35Q16560 246 aaKnown RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 SWSAP1Q6NVH7 229 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 GSPT2Q8IYD1 628 aaKnown RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 GPC2Q8N158 579 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 MCPH1Q8NEM0 835 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 AENQ8WTP8 325 aaKnown RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 HDAC7Q8WUI4 952 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 LCTP09848 1927 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SSC5DA1L4H1 1573 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 NCANO14594 1321 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 GOLGA8IPA6NC78 632 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 GOLGA8JA6NMD2 632 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SPDYE16A6NNV3 312 aaPredicted RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 FOXN3O00409 490 aaPredicted RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 ZNF862O60290 1169 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 TNFRSF8P28908 595 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 CNGA1P29973 690 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 EPHB4P54760 987 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SP4Q02446 784 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 PRKG1Q13976 671 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 PLCB4Q15147 1175 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 MIS18BP1Q6P0N0 1132 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SLFN11Q7Z7L1 901 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 DAAM2Q86T65 1068 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 USP37Q86T82 979 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 IFT20Q8IY31 132 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 RPUSD2Q8IZ73 545 aaKnown RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 MAB21L3Q8N8X9 362 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 USP38Q8NB14 1042 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 RFFLQ8WZ73 363 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 TSPAN18Q96SJ8 248 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 AGPAT1Q99943 283 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 NTPCRQ9BSD7 190 aaKnown RBP10.4□□□□□ -0.74
BPTF-211ENST00000578307 SYT11Q9BT88 431 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 TMEM117Q9H0C3 514 aa10.4□□□□□ -0.74
BPTF-211ENST00000578307 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 H0YCG3 227 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 EBAG9O00559 213 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SHOX2O60902 331 aaPredicted RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 ADRB2P07550 413 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 IMPDH2P12268 514 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ABCB4P21439 1286 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ABCD1P33897 745 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 AARSP49588 968 aaKnown RBP eCLIP10.39□□□□□ -0.75
BPTF-211ENST00000578307 RTP1P59025 263 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 RNASE9P60153 205 aaKnown RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 ACTR2P61160 394 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 PRKCEQ02156 737 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 KRT39Q6A163 491 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 EMBQ6PCB8 327 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 CBWD2Q8IUF1 395 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ARHGEF19Q8IW93 802 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ZSWIM2Q8NEG5 633 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 CHST13Q8NET6 341 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.39□□□□□ -0.75
BPTF-211ENST00000578307 OLIG1Q8TAK6 271 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 PLEKHO2Q8TD55 490 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ACTRT1Q8TDG2 376 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SAAL1Q96ER3 474 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 IFT74Q96LB3 600 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 GDAP1L1Q96MZ0 367 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 HINFPQ9BQA5 517 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 KIFC3Q9BVG8 833 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 GOLPH3Q9H4A6 298 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ATP6V0A4Q9HBG4 840 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SLC24A3Q9HC58 644 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SUCLA2Q9P2R7 463 aaPredicted RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 AMFRQ9UKV5 643 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 PTPRFP10586 1907 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 IGSF9BQ9UPX0 1349 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ANKRD62A6NC57 917 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 A6NNZ2 444 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 CEP104O60308 925 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 HEXIM1O94992 359 aaKnown RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 STBD1O95210 358 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ADSSP30520 456 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 MCCD1P59942 119 aaPredicted RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 MRPS25P82663 173 aaKnown RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 STXBP2Q15833 593 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 XKR3Q5GH77 459 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 ABHD15Q6UXT9 468 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SND1Q7KZF4 910 aaKnown RBP eCLIP10.39□□□□□ -0.75
BPTF-211ENST00000578307 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
BPTF-211ENST00000578307 ANKRD35Q8N283 1001 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 DNERQ8NFT8 737 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 SLC35G2Q8TBE7 412 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
BPTF-211ENST00000578307 POMGNT1Q8WZA1 660 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms