RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PSMA5P28066 241 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 YWHABP31946 246 aaKnown RBP14.88□□□□□ -0.03
COPS3-214ENST00000577246 SSRP1Q08945 709 aaKnown RBP14.88□□□□□ -0.03
COPS3-214ENST00000577246 EMC2Q15006 297 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 LILRA6Q6PI73 481 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 RSPO2Q6UXX9 243 aaPredicted RBP14.88□□□□□ -0.03
COPS3-214ENST00000577246 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 C4orf19Q8IY42 314 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 DAGLBQ8NCG7 672 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 MTRQ99707 1265 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 AGXT2Q9BYV1 514 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 OSBPL6Q9BZF3 934 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 FOXQ1Q9C009 403 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 CSRNP2Q9H175 543 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 SPATA6Q9NWH7 488 aaPredicted RBP14.88□□□□□ -0.03
COPS3-214ENST00000577246 CDH7Q9ULB5 785 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 PCDHGA2Q9Y5H1 932 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 SF3B1O75533 1304 aaKnown RBP eCLIP14.88□□□□□ -0.03
COPS3-214ENST00000577246 MARCH6O60337 910 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 TSPAN1O60635 241 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 XYLBO75191 536 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 CDC45O75419 566 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 TADA2AO75478 443 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 DEXIO95424 95 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 CPA1P15085 419 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 GCFC2P16383 781 aaKnown RBP14.87□□□□□ -0.03
COPS3-214ENST00000577246 POU5F1BQ06416 359 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 GRIK3Q13003 919 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 RSPO4Q2I0M5 234 aaPredicted RBP14.87□□□□□ -0.03
COPS3-214ENST00000577246 VARS2Q5ST30 1063 aaKnown RBP14.87□□□□□ -0.03
COPS3-214ENST00000577246 CPLX2Q6PUV4 134 aaKnown RBP14.87□□□□□ -0.03
COPS3-214ENST00000577246 SUMF1Q8NBK3 374 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 ATRIPQ8WXE1 791 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 ZFP42Q96MM3 310 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 NAP1L4Q99733 375 aaKnown RBP14.87□□□□□ -0.03
COPS3-214ENST00000577246 LXNQ9BS40 222 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 EIF2AQ9BY44 585 aaKnown RBP14.87□□□□□ -0.03
COPS3-214ENST00000577246 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
COPS3-214ENST00000577246 ZNF292O60281 2723 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 INO80B-WBP1J3KQ70 363 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 EML1O00423 815 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 CPLX1O14810 134 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 NCAM2O15394 837 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 PDIA3P30101 505 aaKnown RBP14.86□□□□□ -0.03
COPS3-214ENST00000577246 HOXA9P31269 272 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 PTENP60484 403 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 GPC5P78333 572 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 MLF2Q15773 248 aaPredicted RBP14.86□□□□□ -0.03
COPS3-214ENST00000577246 XKR9Q5GH70 373 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 PDXDC1Q6P996 788 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 GLYCTKQ8IVS8 523 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 KCNB2Q92953 911 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 DDX23Q9BUQ8 820 aaKnown RBP14.86□□□□□ -0.03
COPS3-214ENST00000577246 APOL6Q9BWW8 343 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 GPR62Q9BZJ7 368 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 ZSWIM4Q9H7M6 989 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 KCNMB3Q9NPA1 279 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
COPS3-214ENST00000577246 VAV3Q9UKW4 847 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 HES2Q9Y543 173 aa14.86□□□□□ -0.03
COPS3-214ENST00000577246 EP300Q09472 2414 aaPredicted RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 CCDC194A0A1B0GVG4 234 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 PRR5-ARHGAP8B1AHC4 643 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 M0R2N6 131 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 TBX3O15119 743 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 SLC37A4O43826 429 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 GLULP15104 373 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 EVCP57679 992 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 CCT2P78371 535 aaKnown RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 ARHGAP8P85298 464 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 LMNB2Q03252 620 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 SNW1Q13573 536 aaKnown RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 UBXN2BQ14CS0 331 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 EPHA7Q15375 998 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 INF2Q27J81 1249 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 PPM1LQ5SGD2 360 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 SLC27A1Q6PCB7 646 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 PARM1Q6UWI2 310 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 DCLK2Q8N568 766 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 FGF14Q92915 247 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 CPB2Q96IY4 423 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 B3GALT6Q96L58 329 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 NELL2Q99435 816 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 NFKBIZQ9BYH8 718 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 NXF3Q9H4D5 531 aaKnown RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 NCOA5Q9HCD5 579 aaKnown RBP14.85□□□□□ -0.03
COPS3-214ENST00000577246 FBXW11Q9UKB1 542 aa14.85□□□□□ -0.03
COPS3-214ENST00000577246 DNAH14Q0VDD8 3507 aa14.84□□□□□ -0.03
COPS3-214ENST00000577246 POTEMA6NI47 508 aa14.84□□□□□ -0.03
COPS3-214ENST00000577246 F8W810 466 aa14.84□□□□□ -0.03
COPS3-214ENST00000577246 C8AP07357 584 aa14.84□□□□□ -0.03
COPS3-214ENST00000577246 POU2F2P09086 479 aa14.84□□□□□ -0.03
COPS3-214ENST00000577246 CSTF1Q05048 431 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms