RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 ASAP3Q8TDY4 903 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 EIF2AK1Q9BQI3 630 aaKnown RBP13.13□□□□□ -0.31
CDH8-202ENST00000577228 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
CDH8-202ENST00000577228 GIT1Q9Y2X7 761 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 STK25O00506 426 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 PFKFB2O60825 505 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 DTNBO60941 627 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 DGAT1O75907 488 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 SLITRK3O94933 977 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 LYPLA2O95372 231 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 CFHP08603 1231 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
CDH8-202ENST00000577228 KRT2P35908 639 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 ANGPT1Q15389 498 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 AMHR2Q16671 573 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 FUT10Q6P4F1 479 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 PALB2Q86YC2 1186 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 HDAC7Q8WUI4 952 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 RSAD2Q8WXG1 361 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 WASF1Q92558 559 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
CDH8-202ENST00000577228 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 MYADMQ96S97 322 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH8-202ENST00000577228 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 EPS15L1Q9UBC2 864 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
CDH8-202ENST00000577228 WNT16Q9UBV4 365 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 TPCN1Q9ULQ1 816 aa13.12□□□□□ -0.31
CDH8-202ENST00000577228 B4GALT5O43286 388 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 NPTXRO95502 500 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 C1RP00736 705 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 GLRA2P23416 452 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 AKAP5P24588 427 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 ARL2P36404 184 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 CREMQ03060 361 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 GRIK3Q13003 919 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 NR5A1Q13285 461 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 CALCRLQ16602 461 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 USP41Q3LFD5 358 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 GLYCTKQ8IVS8 523 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 GPR65Q8IYL9 337 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 SLC44A3Q8N4M1 653 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
CDH8-202ENST00000577228 NXPE3Q969Y0 559 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 HSD17B14Q9BPX1 270 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 NFKBIZQ9BYH8 718 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 GPR62Q9BZJ7 368 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
CDH8-202ENST00000577228 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 PCDHA12Q9UN75 941 aa13.11□□□□□ -0.31
CDH8-202ENST00000577228 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 TDRD15B5MCY1 1934 aaKnown RBP13.1□□□□□ -0.31
CDH8-202ENST00000577228 KRBA1A5PL33 1030 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 TGM5O43548 720 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 TADA2AO75478 443 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 PAPLNO95428 1278 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 CTDNEP1O95476 244 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 SRFP11831 508 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 RARRES1P49788 294 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 FOXK2Q01167 660 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 GET4Q7L5D6 327 aaPredicted RBP13.1□□□□□ -0.31
CDH8-202ENST00000577228 CDR2LQ86X02 465 aaPredicted RBP13.1□□□□□ -0.31
CDH8-202ENST00000577228 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 GSTCDQ8NEC7 633 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 PRKD2Q9BZL6 878 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 NT5C3AQ9H0P0 336 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
CDH8-202ENST00000577228 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH8-202ENST00000577228 KLK14Q9P0G3 267 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
CDH8-202ENST00000577228 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH8-202ENST00000577228 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 USO1O60763 962 aaKnown RBP13.09□□□□□ -0.31
CDH8-202ENST00000577228 LAMP2P13473 410 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 RPL17P18621 184 aaKnown RBP13.09□□□□□ -0.31
CDH8-202ENST00000577228 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
CDH8-202ENST00000577228 LILRA6Q6PI73 481 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 PIGOQ8TEQ8 1089 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 CFAP54Q96N23 3096 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 GVINP1Q7Z2Y8 2422 aa13.09□□□□□ -0.31
CDH8-202ENST00000577228 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 A0A087WWV3 80 aa13.08□□□□□ -0.32
CDH8-202ENST00000577228 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms