RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 IL23AQ9NPF7 189 aa3.27□□□□□ -1.89
COPS3-213ENST00000577210 PRDM11Q9NQV5 511 aa3.27□□□□□ -1.89
COPS3-213ENST00000577210 GNL3LQ9NVN8 582 aaKnown RBP3.27□□□□□ -1.89
COPS3-213ENST00000577210 RTEL1Q9NZ71 1219 aa3.27□□□□□ -1.89
COPS3-213ENST00000577210 GPRC5DQ9NZD1 345 aa3.27□□□□□ -1.89
COPS3-213ENST00000577210 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.27□□□□□ -1.89
COPS3-213ENST00000577210 HDAC5Q9UQL6 1122 aa3.27□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA2Q9Y5H1 932 aa3.27□□□□□ -1.89
COPS3-213ENST00000577210 OTOL1A6NHN0 477 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA12O60330 932 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 FOXD2O60548 495 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 MFAP3LO75121 409 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 CNOT4O95628 575 aaKnown RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 SNRPA1P09661 255 aaKnown RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 FTH1P19P0C7X4 201 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 GNAT2P19087 354 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 C5AR1P21730 350 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 MGAT1P26572 445 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 FLT3LGP49771 235 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 ATP2C1P98194 919 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 CDC42EP1Q00587 391 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 NFIXQ14938 502 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 IFIT1BQ5T764 474 aaKnown RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 USP45Q70EL2 814 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 APBB1IPQ7Z5R6 666 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 RSPH3Q86UC2 560 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 FAM83AQ86UY5 434 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 CIR1Q86X95 450 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 FMNL3Q8IVF7 1028 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 DRC7Q8IY82 874 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 ANKRD35Q8N283 1001 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 AOPEPQ8N6M6 819 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 MAGEB6Q8N7X4 407 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 PPM1NQ8N819 430 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 NLGN4YQ8NFZ3 816 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 OR14K1Q8NGZ2 314 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 MTFMTQ96DP5 389 aaKnown RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 CLIP3Q96DZ5 547 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 IL17RAQ96F46 866 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 SENP6Q9GZR1 1112 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 KIAA1683Q9H0B3 1180 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 FAM204AQ9H8W3 233 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 TLR9Q9NR96 1032 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 C1orf112Q9NSG2 853 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 TDP1Q9NUW8 608 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 AURKAIP1Q9NWT8 199 aaPredicted RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 CALCOCO1Q9P1Z2 691 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 CHPF2Q9P2E5 772 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 MAGEL2Q9UJ55 1249 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 INTUQ9ULD6 942 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 THRAP3Q9Y2W1 955 aaKnown RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA9Q9Y5G4 932 aaKnown RBP3.26□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA8Q9Y5G5 932 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA7Q9Y5G6 932 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA6Q9Y5G7 932 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 PCDHGA3Q9Y5H0 932 aa3.26□□□□□ -1.89
COPS3-213ENST00000577210 PJA2O43164 708 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 CAND2O75155 1236 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 TMEM127O75204 238 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 ITGA10O75578 1167 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 RAD17O75943 681 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 SCGB1D2O95969 90 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 POU2F2P09086 479 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 ALAS1P13196 640 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 PDCP20941 246 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 CNR2P34972 360 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 CCT2P78371 535 aaKnown RBP3.25□□□□□ -1.89
COPS3-213ENST00000577210 APBA1Q02410 837 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 CREMQ03060 361 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 RIN1Q13671 783 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 MLC1Q15049 377 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 RNF151Q2KHN1 245 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 PGS1Q32NB8 556 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 FAM47AQ5JRC9 791 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 ATAT1Q5SQI0 421 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 FAM111BQ6SJ93 734 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 POLNQ7Z5Q5 900 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 ZDHHC14Q8IZN3 488 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 PQLC1Q8N2U9 271 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 TTC9BQ8N6N2 239 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 PIK3C3Q8NEB9 887 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 NRG4Q8WWG1 115 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 TTC17Q96AE7 1141 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 RPL10LQ96L21 214 aaKnown RBP3.25□□□□□ -1.89
COPS3-213ENST00000577210 FAM193BQ96PV7 902 aaPredicted RBP3.25□□□□□ -1.89
COPS3-213ENST00000577210 REXO4Q9GZR2 422 aaKnown RBP3.25□□□□□ -1.89
COPS3-213ENST00000577210 ADAM7Q9H2U9 754 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 NCDNQ9UBB6 729 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 JAG2Q9Y219 1238 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 SLC30A1Q9Y6M5 507 aa3.25□□□□□ -1.89
COPS3-213ENST00000577210 UBE2QL1A1L167 161 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 CCDC154A6NI56 674 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 PRR5-ARHGAP8B1AHC4 643 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 ADCY6O43306 1168 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 HTRA2O43464 458 aaPredicted RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 CTNND1O60716 968 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 PPFIA4O75335 1185 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 PARNO95453 639 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 MTHFD1P11586 935 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 ATF3P18847 181 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms