RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 COLGALT2Q8IYK4 626 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 KCTD17Q8N5Z5 321 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
SF3B3-215ENST00000577085 AK8Q96MA6 479 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 PLIN2Q99541 437 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 COLEC11Q9BWP8 271 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
SF3B3-215ENST00000577085 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
SF3B3-215ENST00000577085 ZMYM2Q9UBW7 1377 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 PI4K2BG5E9Z4 385 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 C2CD2LO14523 706 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 INPPL1O15357 1258 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 B4GALT3O60512 393 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 CUL4AQ13619 759 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 TMEM31Q5JXX7 168 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 CABP7Q86V35 215 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 MMTAG2Q9BU76 263 aaKnown RBP17.08■□□□□ 0.32
SF3B3-215ENST00000577085 RUSC1Q9BVN2 902 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 CCDC113Q9H0I3 377 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 IRAK3Q9Y616 596 aa17.08■□□□□ 0.32
SF3B3-215ENST00000577085 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 DCXO43602 365 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 KLRC2P26717 231 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 NPTX2P47972 431 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 SMTNP53814 917 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 DSC1Q08554 894 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 CBX2Q14781 532 aaPredicted RBP17.07■□□□□ 0.32
SF3B3-215ENST00000577085 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■■■■□ 22.5
SF3B3-215ENST00000577085 RPGRIP1Q96KN7 1286 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 PHF7Q9BWX1 381 aaPredicted RBP17.07■□□□□ 0.32
SF3B3-215ENST00000577085 C17orf75Q9HAS0 396 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 MIOSQ9NXC5 875 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 SNTG2Q9NY99 539 aa17.07■□□□□ 0.32
SF3B3-215ENST00000577085 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
SF3B3-215ENST00000577085 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 TADA2AO75478 443 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 RECQL4O94761 1208 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 SOD2P04179 222 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 GLUD2P49448 558 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 ITIH3Q06033 890 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 STRN3Q13033 797 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 KCNC3Q14003 757 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 SF3A1Q15459 793 aaKnown RBP17.06■□□□□ 0.32
SF3B3-215ENST00000577085 HYIQ5T013 277 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 ELMSAN1Q6PJG2 1045 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 C1orf186Q6ZWK4 172 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 KCNK18Q7Z418 384 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 TCHPQ9BT92 498 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
SF3B3-215ENST00000577085 KCND2Q9NZV8 630 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 USP20Q9Y2K6 914 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
SF3B3-215ENST00000577085 SLC26A4O43511 780 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 THP07101 528 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 COL9A1P20849 921 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
SF3B3-215ENST00000577085 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
SF3B3-215ENST00000577085 SYCE2Q6PIF2 218 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 SYT2Q8N9I0 419 aaPredicted RBP17.05■□□□□ 0.32
SF3B3-215ENST00000577085 RIPOR3Q96MK2 946 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 NECTIN4Q96NY8 510 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 HERC2P3Q9BVR0 1158 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 VN1R3Q9BXE9 311 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 ADAM7Q9H2U9 754 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 MARCH5Q9NX47 278 aa17.05■□□□□ 0.32
SF3B3-215ENST00000577085 FAM86C2PA6NEL3 165 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 SFI1A8K8P3 1242 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 KRT18P05783 430 aaKnown RBP17.04■□□□□ 0.32
SF3B3-215ENST00000577085 ADH1AP07327 375 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 EPCAMP16422 314 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 TUSC3Q13454 348 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
SF3B3-215ENST00000577085 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
SF3B3-215ENST00000577085 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 EEF1DP3Q658K8 133 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 RNF135Q8IUD6 432 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 GSTCDQ8NEC7 633 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 SUSD6Q92537 303 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 INTS4Q96HW7 963 aaKnown RBP17.04■□□□□ 0.32
SF3B3-215ENST00000577085 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 S1PR5Q9H228 398 aa17.04■□□□□ 0.32
SF3B3-215ENST00000577085 TMEM134Q9H6X4 195 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms