RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NCAM2O15394 837 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 TARSP26639 723 aaKnown RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 GNA11P29992 359 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 ADD1P35611 737 aaKnown RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 DSC1Q08554 894 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 PLA2G4FQ68DD2 849 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 FUT10Q6P4F1 479 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 RSPO2Q6UXX9 243 aaPredicted RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 TPRG1Q6ZUI0 275 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 SRGAP1Q7Z6B7 1085 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 CNNM3Q8NE01 707 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 ITFG1Q8TB96 612 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 CCDC12Q8WUD4 166 aaPredicted RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 PRPF31Q8WWY3 499 aaKnown RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 CLDN23Q96B33 292 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 ZFP42Q96MM3 310 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 NELL2Q99435 816 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 JPH2Q9BR39 696 aaPredicted RBP18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 APOL6Q9BWW8 343 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 HES2Q9Y543 173 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 IPPQ9Y573 584 aa18.21■□□□□ 0.51
CTDNEP1-211ENST00000575783 KLF18A0A0U1RQI7 1052 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 CCL16O15467 120 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 MTAPQ13126 283 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 NECTIN1Q15223 517 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 PRSS55Q6UWB4 352 aaPredicted RBP18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 ANO5Q75V66 913 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 RDM1Q8NG50 284 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 TMEM143Q96AN5 459 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 PHF20Q9BVI0 1012 aa18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 EIF2AQ9BY44 585 aaKnown RBP18.2■□□□□ 0.5
CTDNEP1-211ENST00000575783 SLC30A4O14863 429 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 EDIL3O43854 480 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 PSMD10O75832 226 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 NPEPPSP55786 919 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 CREMQ03060 361 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 PPM1LQ5SGD2 360 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 ZNF852Q6ZMS4 543 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 NETO1Q8TDF5 533 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 SLC7A3Q8WY07 619 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 FAM126AQ9BYI3 521 aaPredicted RBP18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 DOCK8Q8NF50 2099 aa18.19■□□□□ 0.5
CTDNEP1-211ENST00000575783 TADA2AO75478 443 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 ERLIN2O94905 339 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 RPS9P46781 194 aaKnown RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 USP11P51784 963 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 LAMTOR4Q0VGL1 99 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 PRR23BQ6ZRT6 265 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 ZNF579Q8NAF0 562 aaKnown RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 PSPC1Q8WXF1 523 aaKnown RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 PRMT8Q9NR22 394 aaPredicted RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 HEBP1Q9NRV9 189 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 BMP2KQ9NSY1 1161 aaPredicted RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 FBXW11Q9UKB1 542 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 ADAM28Q9UKQ2 775 aa18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 MRPS17Q9Y2R5 130 aaKnown RBP18.18■□□□□ 0.5
CTDNEP1-211ENST00000575783 XYLBO75191 536 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 C8AP07357 584 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 HNRNPA1P09651 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 PSMC5P62195 406 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 ADCY1Q08828 1119 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 LAIR1Q6GTX8 287 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 RNF149Q8NC42 400 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 CPB2Q96IY4 423 aa18.17■□□□□ 0.5
CTDNEP1-211ENST00000575783 NRLP54845 237 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 FZD5Q13467 585 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 CELF5Q8N6W0 485 aaKnown RBP18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 ING5Q8WYH8 240 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 CEP170P1Q96L14 293 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 HCFC1R1Q9NWW0 138 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 CACNG4Q9UBN1 327 aa18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 NDRG2Q9UN36 371 aaKnown RBP18.16■□□□□ 0.5
CTDNEP1-211ENST00000575783 BAHCC1Q9P281 2608 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 CCDC196A0A1B0GTZ2 297 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 RETP07949 1114 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 AKAP5P24588 427 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 DMWDQ09019 674 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 NOTUMQ6P988 496 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 NPAS3Q8IXF0 933 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 HASPINQ8TF76 798 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 MCRS1Q96EZ8 462 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 CLSTN3Q9BQT9 956 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 PLA2G2FQ9BZM2 168 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 TRIM6Q9C030 488 aaPredicted RBP18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 SEMA4GQ9NTN9 838 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 GIT1Q9Y2X7 761 aa18.15■□□□□ 0.5
CTDNEP1-211ENST00000575783 PRPF3O43395 683 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-211ENST00000575783 GDF9O60383 454 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms