RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 LAG3P18627 525 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 IBSPP21815 317 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 GRM5P41594 1212 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 POU5F1Q01860 360 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 EHHADHQ08426 723 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 SNW1Q13573 536 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 CUL4BQ13620 913 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 NOLC1Q14978 699 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 TPRNQ4KMQ1 711 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 ZC2HC1CQ53FD0 456 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 NOMO2Q5JPE7 1267 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 CLLU1OSQ5K130 101 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 L1TD1Q5T7N2 865 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 EEF1DP3Q658K8 133 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 AGMOQ6ZNB7 445 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 CDR2LQ86X02 465 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 HELQQ8TDG4 1101 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 CLP1Q92989 425 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 CASD1Q96PB1 797 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 CDT1Q9H211 546 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 SEMA6BQ9H3T3 888 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 EXOC1Q9NV70 894 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 RMND1Q9NWS8 449 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 PCDHB12Q9Y5F1 795 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 UBE4BO95155 1302 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 FNDC1Q4ZHG4 1894 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 C5orf67F2Z3F1 127 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 NR1I2O75469 434 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 SMC2O95347 1197 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 LDHAP00338 332 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 EDN1P05305 212 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 BMPR1AP36894 532 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 RNASELQ05823 741 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 MCL1Q07820 350 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 DPYDQ12882 1025 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 KCNB1Q14721 858 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 PAN2Q504Q3 1202 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 SPOUT1Q5T280 376 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 TMEM192Q8IY95 271 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 SYCP3Q8IZU3 236 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 DEFB123Q8N688 67 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF507Q8TCN5 953 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 LPPQ93052 612 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 P2RX5Q93086 422 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 ACAP3Q96P50 834 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 FAM193BQ96PV7 902 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 GSDMAQ96QA5 445 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 TSPAN18Q96SJ8 248 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 C11orf84Q9BUA3 381 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 TTYH1Q9H313 450 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 NXF3Q9H4D5 531 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 RNF19AQ9NV58 838 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 TYW1Q9NV66 732 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 TBC1D7Q9P0N9 293 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 CGNQ9P2M7 1197 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 MRPL42Q9Y6G3 142 aaKnown RBP10.46□□□□□ -0.73
CCDC40-214ENST00000575431 STYXL1Q9Y6J8 313 aa10.46□□□□□ -0.73
CCDC40-214ENST00000575431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-214ENST00000575431 A0A0B4J269 797 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 ARL5CA6NH57 179 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 ABLIM1O14639 778 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 OGTO15294 1046 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 KLRC4O43908 158 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 GADD45BO75293 160 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-214ENST00000575431 RHOBTB3O94955 611 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 RPN1P04843 607 aaKnown RBP10.45□□□□□ -0.74
CCDC40-214ENST00000575431 CLTAP09496 248 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 GARTP22102 1010 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 PPM1AP35813 382 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 ALDH7A1P49419 539 aaKnown RBP10.45□□□□□ -0.74
CCDC40-214ENST00000575431 GRIK3Q13003 919 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 BMT2Q1RMZ1 405 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 EPC2Q52LR7 807 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 EPM2AIP1Q7L775 607 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-214ENST00000575431 ZBTB33Q86T24 672 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 CD302Q8IX05 232 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 GRAMD1CQ8IYS0 662 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 RPS6KC1Q96S38 1066 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 GAD1Q99259 594 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 TMEM175Q9BSA9 504 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 APOL6Q9BWW8 343 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 LMAN2LQ9H0V9 348 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 TBC1D13Q9NVG8 400 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 LMCD1Q9NZU5 365 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 ANKFY1Q9P2R3 1169 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 STK39Q9UEW8 545 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 INPP5FQ9Y2H2 1132 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 USP20Q9Y2K6 914 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 HES2Q9Y543 173 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 TRIOBPQ9H2D6 2365 aa10.45□□□□□ -0.74
CCDC40-214ENST00000575431 MEIS3P2A8K0S8 358 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 H3BNC9 293 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms