RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 VPS52Q8N1B4 723 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 FSIP1Q8NA03 581 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 CCDC112Q8NEF3 446 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 PGBD1Q96JS3 809 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 PYM1Q9BRP8 204 aaKnown RBP11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 ATP6V0A4Q9HBG4 840 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 RXFP3Q9NSD7 469 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 TRPV2Q9Y5S1 764 aa11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
HCFC1R1-206ENST00000574151 CNTNAP5Q8WYK1 1306 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 FAM237AA0A1B0GTK4 181 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 M0QZ92 97 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 MYBP10242 640 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 FUT2Q10981 343 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 SIM2Q14190 667 aaPredicted RBP11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 SF3A2Q15428 464 aaKnown RBP11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 GRIK4Q16099 956 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 GATA6Q92908 595 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 RPP25Q9BUL9 199 aaKnown RBP11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 IGSF5Q9NSI5 407 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 SQORQ9Y6N5 450 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 ASXL3Q9C0F0 2248 aa11.12□□□□□ -0.63
HCFC1R1-206ENST00000574151 IGSF9BQ9UPX0 1349 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 GIPC1O14908 333 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 CTDNEP1O95476 244 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 TGFB3P10600 412 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 MARK3P27448 753 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 IQCB1Q15051 598 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 CAMK4Q16566 473 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 MARCH8Q5T0T0 291 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 PDZD3Q86UT5 571 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 CKAP2LQ8IYA6 745 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 ADAM32Q8TC27 787 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 CASD1Q96PB1 797 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 USP28Q96RU2 1077 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 FAM126AQ9BYI3 521 aaPredicted RBP11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 RGS18Q9NS28 235 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 EPS15L1Q9UBC2 864 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 GINS2Q9Y248 185 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 NUMBLQ9Y6R0 609 aa11.11□□□□□ -0.63
HCFC1R1-206ENST00000574151 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 ESYT2A0FGR8 921 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 C9IYK1 514 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 CUTAO60888 179 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 KRT2P35908 639 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 LIMK1P53667 647 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 MTAPQ13126 283 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 SRSF5Q13243 272 aaKnown RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 PGM5Q15124 567 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 MLF2Q15773 248 aaPredicted RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 STPG1Q5TH74 334 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 LUZP1Q86V48 1076 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 TRIML1Q8N9V2 468 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 STAMQ92783 540 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 NAP1L4Q99733 375 aaKnown RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 DDX23Q9BUQ8 820 aaKnown RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 LSM14BQ9BX40 385 aaKnown RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 DNAJC25Q9H1X3 360 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 TTC12Q9H892 705 aaPredicted RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 LTB4R2Q9NPC1 389 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 PRMT8Q9NR22 394 aaPredicted RBP11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
HCFC1R1-206ENST00000574151 CCDC195A0A1B0GUA6 201 aa11.09□□□□□ -0.63
HCFC1R1-206ENST00000574151 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
HCFC1R1-206ENST00000574151 GOLGA6L9A6NEM1 432 aa11.09□□□□□ -0.63
HCFC1R1-206ENST00000574151 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
HCFC1R1-206ENST00000574151 LAMP2P13473 410 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms