RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TYRP14679 529 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PRKCAP17252 672 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 SYN1P17600 705 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 FGFR2P21802 821 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PTGS1P23219 599 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 MC4RP32245 332 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 ELF1P32519 619 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 KRT9P35527 623 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 CYP4F8P98187 520 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 GALNT1Q10472 559 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 SLC35G1Q2M3R5 365 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 KHDC1LQ5JSQ8 128 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 VPS53Q5VIR6 699 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 ICE2Q659A1 982 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 ZNF385CQ66K41 422 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 BICRALQ6AI39 1079 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 GALNT18Q6P9A2 607 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 C4orf50Q6ZRC1 276 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 BEND5Q7L4P6 421 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 RSPH3Q86UC2 560 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 TXNRD3Q86VQ6 643 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 GLB1L2Q8IW92 636 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PLD6Q8N2A8 252 aaKnown RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 GALNT15Q8N3T1 639 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 BEND7Q8N7W2 519 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 ARRDC4Q8NCT1 418 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 NUP43Q8NFH3 380 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 OR2I1PQ8NGU4 316 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 TTLL11Q8NHH1 800 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.46□□□□□ -2.02
CHD3-217ENST00000574022 SLC30A5Q8TAD4 765 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 WDR48Q8TAF3 677 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 ASB11Q8WXH4 323 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 MSLNLQ96KJ4 702 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 HIST1H2AHQ96KK5 128 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 DMRTA2Q96SC8 542 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 HIST1H2AJQ99878 128 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 VRK1Q99986 396 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 HEPHQ9BQS7 1158 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 FAM167BQ9BTA0 163 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 METTL22Q9BUU2 404 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 BRIP1Q9BX63 1249 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 OSBPL1AQ9BXW6 950 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 STK33Q9BYT3 514 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PITHD1Q9GZP4 211 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.46□□□□□ -2.02
CHD3-217ENST00000574022 OSBPL5Q9H0X9 879 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 OBP2BQ9NPH6 170 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 SERHLQ9NQF3 203 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 SACM1LQ9NTJ5 587 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 GJB4Q9NTQ9 266 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PIH1D1Q9NWS0 290 aaKnown RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.46□□□□□ -2.02
CHD3-217ENST00000574022 MYO1AQ9UBC5 1043 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 EBF1Q9UH73 591 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 ACSL6Q9UKU0 697 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 SLC39A10Q9ULF5 831 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PCDHA6Q9UN73 950 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 RAXQ9Y2V3 346 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 SLC45A1Q9Y2W3 748 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 PCDHA1Q9Y5I3 950 aa2.46□□□□□ -2.02
CHD3-217ENST00000574022 RPTORQ8N122 1335 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SETD1BQ9UPS6 1966 aaKnown RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 A0A1W2PPC4 97 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 A6NCN8 305 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 LGALS16A8MUM7 142 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 K7ENM7 598 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SYT5O00445 386 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 NPC1O15118 1278 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 THAP12O43422 761 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CUTAO60888 179 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 BAIAP3O94812 1187 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ENDOD1O94919 500 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ARHGEF15O94989 841 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 MPIG6BO95866 241 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CD4P01730 458 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ENO2P09104 434 aaPredicted RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 NPR1P16066 1061 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 XBP1P17861 261 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 EN2P19622 333 aaPredicted RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 CAPN3P20807 821 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 PTMSP20962 102 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 FUT4P22083 530 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CNTFP26441 200 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 APEX1P27695 318 aaKnown RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 ADSLP30566 484 aaPredicted RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 COPB2P35606 906 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SERPINF1P36955 418 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 GMPRP36959 345 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CDC42EP1Q00587 391 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 NUCB1Q02818 461 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 MGAT5Q09328 741 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 FOXO1Q12778 655 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 NFATC3Q12968 1075 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SNAPC2Q13487 334 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 RAB39AQ14964 217 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SEPT2Q15019 361 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 C3orf38Q5JPI3 329 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 GJC2Q5T442 439 aaPredicted RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 ANKRD45Q5TZF3 282 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms