RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 EXOC3O60645 756 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 UPP2O95045 317 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 STAG3L1P0CL83 205 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 ITGA4P13612 1032 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 BMP6P22004 513 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 GARTP22102 1010 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 PROZP22891 400 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 RPL13P26373 211 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 HOXD13P35453 343 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 YARSP54577 528 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 STX17P56962 302 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 OSTNP61366 133 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 WDR5P61964 334 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 TYRO3Q06418 890 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 MCL1Q07820 350 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 HSP90AA2PQ14568 343 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 KYAT1Q16773 422 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 TPD52L1Q16890 204 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 TCTN1Q2MV58 587 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 UBXN11Q5T124 520 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 SLC39A4Q6P5W5 647 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 ABI1Q8IZP0 508 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 HERVK_113Q902F9 699 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 VWCEQ96DN2 955 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 CBWD1Q9BRT8 395 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 CCDC94Q9BW85 323 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 TRAIPQ9BWF2 469 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 KCTD10Q9H3F6 313 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 NXF3Q9H4D5 531 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 PCIF1Q9H4Z3 704 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 PTPRHQ9HD43 1115 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 PARP2Q9UGN5 583 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 AGO2Q9UKV8 859 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 IPPQ9Y573 584 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 SLC4A7Q9Y6M7 1214 aa10.31□□□□□ -0.76
NPLOC4-208ENST00000572351 ARID2Q68CP9 1835 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 MYH9P35579 1960 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 A0A0B4J269 797 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 C9IYK1 514 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 OGTO15294 1046 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 HOXA2O43364 376 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 LDHAP00338 332 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 NR3C1P04150 777 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 NR2F2P24468 414 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 AKAP5P24588 427 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 CCNE1P24864 410 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 ADSSP30520 456 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 CEP135Q66GS9 1140 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 FAM117BQ6P1L5 589 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 RTN4RL1Q86UN2 441 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 ECHDC2Q86YB7 292 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 GPD1LQ8N335 351 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 XXYLT1Q8NBI6 393 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 LPPQ93052 612 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 SAAL1Q96ER3 474 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 ACAP3Q96P50 834 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 FAM213AQ9BRX8 229 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 ELAC1Q9H777 363 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 UBN1Q9NPG3 1134 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 TOPORSQ9NS56 1045 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 TMEM161AQ9NX61 479 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 SNTG2Q9NY99 539 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 HSPBP1Q9NZL4 362 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 RWDD2AQ9UIY3 292 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 TRAF3IP3Q9Y228 551 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 HES2Q9Y543 173 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 STYXL1Q9Y6J8 313 aa10.3□□□□□ -0.76
NPLOC4-208ENST00000572351 TCHHQ07283 1943 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 GOLGA8IPA6NC78 632 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 TRIM49BA6NDI0 452 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 GOLGA8JA6NMD2 632 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ABLIM1O14639 778 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CETN3O15182 167 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 EXTL3O43909 919 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ZNF623O75123 536 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 RECQL4O94761 1208 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 FGFR1OPO95684 399 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 EOMESO95936 686 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CLTAP09496 248 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ERCC5P28715 1186 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 GRM5P41594 1212 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ACOT2P49753 483 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 FAM189BP81408 668 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 DEFB103AP81534 67 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ADAM9Q13443 819 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 MYBPC2Q14324 1141 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 SHHQ15465 462 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 EDRF1Q3B7T1 1238 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ANO6Q4KMQ2 910 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CT47A1Q5JQC4 288 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 C9orf50Q5SZB4 431 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms