RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
CFDP1-210ENST00000570279 JRKLQ9Y4A0 524 aa4.57□□□□□ -1.68
CFDP1-210ENST00000570279 RNF114Q9Y508 228 aa4.57□□□□□ -1.68
CFDP1-210ENST00000570279 UBR2Q8IWV8 1755 aa4.57□□□□□ -1.68
CFDP1-210ENST00000570279 NUP188Q5SRE5 1749 aa4.57□□□□□ -1.68
CFDP1-210ENST00000570279 XDHP47989 1333 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ATXN2Q99700 1313 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 TJP1Q07157 1748 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 A0A087X0B3 334 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CCDC194A0A1B0GVG4 234 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 H3BQF6 201 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 MYO1CO00159 1063 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SHOX2O60902 331 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 TACC1O75410 805 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 LCA5LO95447 670 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CPP00450 1065 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ESR1P03372 595 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 PARP1P09874 1014 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SRFP11831 508 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 NME1P15531 152 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CCNE1P24864 410 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CCNFP41002 786 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 UBA7P41226 1012 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 STAT6P42226 847 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 AFMP43652 599 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 TNNT3P45378 269 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 VAV2P52735 878 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CORO7P57737 925 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 VSNL1P62760 191 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 RNF4P78317 190 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ST5P78524 1137 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 GRIN1Q05586 938 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 KIF5AQ12840 1032 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 MTF1Q14872 753 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SEPT2Q15019 361 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SF3B3Q15393 1217 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ZNF174Q15697 407 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 NPY5RQ15761 445 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 HLFQ16534 295 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ZNF827Q17R98 1081 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 GAB4Q2WGN9 574 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 DNAJC21Q5F1R6 531 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 RRP12Q5JTH9 1297 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SPECC1Q5M775 1068 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CCDC122Q5T0U0 273 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 EMC10Q5UCC4 262 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 KLHL10Q6JEL2 608 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 EMBQ6PCB8 327 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CCNI2Q6ZMN8 369 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 BRINP3Q76B58 766 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 KIAA1328Q86T90 577 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 TSPYL5Q86VY4 417 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CREG2Q8IUH2 290 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 BLIDQ8IZY5 108 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 C4orf32Q8N8J7 132 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 AFAP1L1Q8TED9 768 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CPLX3Q8WVH0 158 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SYN2Q92777 582 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 SYTL4Q96C24 671 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 VWCEQ96DN2 955 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ALS2CR12Q96Q35 445 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ALPK1Q96QP1 1244 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 PNKPQ96T60 521 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CRACR2AQ9BSW2 395 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ANKRD2Q9GZV1 360 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ZCCHC17Q9NP64 241 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 EXOC1Q9NV70 894 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 VPS54Q9P1Q0 977 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 VPS18Q9P253 973 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 PUF60Q9UHX1 559 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 DUSP13Q9UII6 198 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 GGA2Q9UJY4 613 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ZNRF3Q9ULT6 936 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 CTNND2Q9UQB3 1225 aa4.56□□□□□ -1.68
CFDP1-210ENST00000570279 RRP15Q9Y3B9 282 aaKnown RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 COL22A1Q8NFW1 1626 aaPredicted RBP4.56□□□□□ -1.68
CFDP1-210ENST00000570279 ATP8B3O60423 1300 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 A0A087WUV0 522 aaPredicted RBP4.55□□□□□ -1.68
CFDP1-210ENST00000570279 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 SSU72P8A0A1W2PR75 194 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 TTC26A0AVF1 554 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 ESYT2A0FGR8 921 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 SHISA3A0PJX4 238 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 GRID2IPA4D2P6 1211 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 CES2O00748 559 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 TNFRSF10CO14798 259 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 PRKAB2O43741 272 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 ZEB2O60315 1214 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 CLEC3AO75596 197 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 RHOXF2BP0C7M4 288 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 IMPDH2P12268 514 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 TRIM21P19474 475 aaKnown RBP4.55□□□□□ -1.68
CFDP1-210ENST00000570279 ANXA13P27216 316 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 GNA11P29992 359 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 USP8P40818 1118 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 PRCPP42785 496 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 PAFAH1B1P43034 410 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 EPHB4P54760 987 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 STX17P56962 302 aa4.55□□□□□ -1.68
CFDP1-210ENST00000570279 GSTO1P78417 241 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms