RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
VPS9D1-207ENST00000568691 HERC2P3Q9BVR0 1158 aa13.33□□□□□ -0.28
VPS9D1-207ENST00000568691 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
VPS9D1-207ENST00000568691 IGLV3-22A0A075B6J6 115 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 C1QTNF9BB2RNN3 333 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 TGM5O43548 720 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 ZNF623O75123 536 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 DEXIO95424 95 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 RETP07949 1114 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 C1QTNF9P0C862 333 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 RPS9P46781 194 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 DMWDQ09019 674 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 GLB1LQ6UWU2 654 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 BRAPQ7Z569 592 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 TMEM121BQ9BXQ6 578 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 PRKD2Q9BZL6 878 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 RXFP3Q9NSD7 469 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 DACT1Q9NYF0 836 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 ZMIZ1Q9ULJ6 1067 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 CNTNAP5Q8WYK1 1306 aa13.32□□□□□ -0.28
VPS9D1-207ENST00000568691 ADAMTS3O15072 1205 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 MAGEB2O15479 319 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 ADH1AP07327 375 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 HOXC13P31276 330 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 MAGEA9P43362 315 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 KRT85P78386 507 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 RNASELQ05823 741 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 RESTQ13127 1097 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 CSRP2Q16527 193 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 PALB2Q86YC2 1186 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 CRYGNQ8WXF5 182 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 CEP89Q96ST8 783 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 MAP7D2Q96T17 732 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 CDH7Q9ULB5 785 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 NBEAQ8NFP9 2946 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 AKAP13Q12802 2813 aa13.31□□□□□ -0.28
VPS9D1-207ENST00000568691 DSPP15924 2871 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 F5P12259 2224 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 HRO43593 1189 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 LRP3O75074 770 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 MBD3O95983 291 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 URODP06132 367 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 XBP1P17861 261 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 RXRAP19793 462 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 KCNA4P22459 653 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 DSG1Q02413 1049 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 FUT2Q10981 343 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 SRSF5Q13243 272 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 TRIM29Q14134 588 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 UGCGQ16739 394 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 ZBTB41Q5SVQ8 909 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 TPRG1Q6ZUI0 275 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 GRASPQ7Z6J2 395 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 CKAP2LQ8IYA6 745 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 ITFG1Q8TB96 612 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 HDAC7Q8WUI4 952 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 RSPH1Q8WYR4 309 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 KXD1Q9BQD3 176 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 TMEM175Q9BSA9 504 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 PLA2G2FQ9BZM2 168 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 ZDHHC7Q9NXF8 308 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 GABBR1Q9UBS5 961 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 SEC63Q9UGP8 760 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 WASF3Q9UPY6 502 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 SMG1Q96Q15 3661 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-207ENST00000568691 GCN1Q92616 2671 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 A0A087WZ62 844 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 GAS2O43903 313 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 FSHRP23945 695 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 SREBF1P36956 1147 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 TARBP2Q15633 366 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 KLHL40Q2TBA0 621 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 UBXN11Q5T124 520 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 TWF2Q6IBS0 349 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 NIPA1Q7RTP0 329 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 MRPL10Q7Z7H8 261 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 COLGALT2Q8IYK4 626 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 CELF5Q8N6W0 485 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms