RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 HERC4Q5GLZ8 1057 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-213ENST00000568158 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 GRAMD1CQ8IYS0 662 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-213ENST00000568158 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 TCHPQ9BT92 498 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 PLVAPQ9BX97 442 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 GBP3Q9H0R5 595 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 UBN1Q9NPG3 1134 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 AAASQ9NRG9 546 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 TBX20Q9UMR3 447 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 GIT1Q9Y2X7 761 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
CNOT1-213ENST00000568158 PRRC2BQ5JSZ5 2229 aaKnown RBP14.27□□□□□ -0.12
CNOT1-213ENST00000568158 ABLIM1O14639 778 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 B4GALT3O60512 393 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 LAG3P18627 525 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 MLH1P40692 756 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 SCNN1GP51170 649 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 NDUFA8P51970 172 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 BCAR1P56945 870 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 OSTNP61366 133 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 GTF2BQ00403 316 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 AMPD3Q01432 767 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 RNASELQ05823 741 aaKnown RBP14.27□□□□□ -0.13
CNOT1-213ENST00000568158 HACE1Q8IYU2 909 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 LRRC43Q8N309 656 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 CEP120Q8N960 986 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 FSIP1Q8NA03 581 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 GSTCDQ8NEC7 633 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 URGCPQ8TCY9 931 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 P2RX5Q93086 422 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 HPS3Q969F9 1004 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 C7orf25Q9BPX7 421 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 C11orf84Q9BUA3 381 aaPredicted RBP14.27□□□□□ -0.13
CNOT1-213ENST00000568158 TRIM9Q9C026 710 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 HAPLN2Q9GZV7 340 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 CDT1Q9H211 546 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 BLZF1Q9H2G9 400 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 IKZF4Q9H2S9 585 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 KANSL3Q9P2N6 904 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
CNOT1-213ENST00000568158 HPSEQ9Y251 543 aa14.27□□□□□ -0.13
CNOT1-213ENST00000568158 MYO7AQ13402 2215 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 TRIP11Q15643 1979 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 H0YCG3 227 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 ZC3H11AO75152 810 aaKnown RBP eCLIP14.26□□□□□ -0.13
CNOT1-213ENST00000568158 FGF18O76093 207 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 GALTP07902 379 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
CNOT1-213ENST00000568158 GAP43P17677 238 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 PROZP22891 400 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 CUL4BQ13620 913 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 CAMK1Q14012 370 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 DCAF4L1Q3SXM0 396 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 ZNF568Q3ZCX4 644 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 SEZ6Q53EL9 994 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 CCDC65Q8IXS2 484 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 THNSL1Q8IYQ7 743 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 POF1BQ8WVV4 589 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 BICD1Q96G01 975 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 ZNF558Q96NG5 402 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 FAM193BQ96PV7 902 aaPredicted RBP14.26□□□□□ -0.13
CNOT1-213ENST00000568158 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
CNOT1-213ENST00000568158 FGFBP2Q9BYJ0 223 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 GOLPH3LQ9H4A5 285 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 MRPL44Q9H9J2 332 aaKnown RBP14.26□□□□□ -0.13
CNOT1-213ENST00000568158 LMCD1Q9NZU5 365 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 CHMP5Q9NZZ3 219 aa14.26□□□□□ -0.13
CNOT1-213ENST00000568158 FAM237AA0A1B0GTK4 181 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 A0A1W2PQ27 194 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 A0A1W2PQ64 194 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 A0A1W2PQD8 194 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ANKRD63C9JTQ0 380 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 INPPL1O15357 1258 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
CNOT1-213ENST00000568158 TOM1L1O75674 476 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 RECQL4O94761 1208 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ALDH2P05091 517 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 SLFN14P0C7P3 912 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 MYBP10242 640 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
CNOT1-213ENST00000568158 SYKP43405 635 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 SLC11A1P49279 550 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ALDH7A1P49419 539 aaKnown RBP14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ASIC1P78348 528 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 KCNA1Q09470 495 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ZPBP2Q6X784 338 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 CEP57L1Q8IYX8 460 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 SLC39A11Q8N1S5 342 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms