RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 EBF1Q9UH73 591 aa6.88□□□□□ -1.31
UBE3A-205ENST00000566215 TPCN1Q9ULQ1 816 aa6.88□□□□□ -1.31
UBE3A-205ENST00000566215 BRWD1Q9NSI6 2320 aa6.88□□□□□ -1.31
UBE3A-205ENST00000566215 H0Y626 953 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 TRIM16O95361 564 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 CHMLP26374 656 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 RBM10P98175 930 aaKnown RBP6.87□□□□□ -1.31
UBE3A-205ENST00000566215 PLCB2Q00722 1185 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 NECTIN1Q15223 517 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 AMHR2Q16671 573 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 CCDC26Q8TAB7 109 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 GATA6Q92908 595 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 ZNF577Q9BSK1 485 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 TEKT3Q9BXF9 490 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 VAT1LQ9HCJ6 419 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 ANKEF1Q9NU02 776 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 TGM5O43548 720 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 DDHD2O94830 711 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 PSMC5P62195 406 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 PRKCEQ02156 737 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 KRT32Q14532 448 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 ZNF268Q14587 947 aaPredicted RBP6.87□□□□□ -1.31
UBE3A-205ENST00000566215 HSF5Q4G112 596 aaPredicted RBP6.87□□□□□ -1.31
UBE3A-205ENST00000566215 C20orf194Q5TEA3 1177 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 SWSAP1Q6NVH7 229 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 NOTUMQ6P988 496 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 RALGPS2Q86X27 583 aaPredicted RBP6.87□□□□□ -1.31
UBE3A-205ENST00000566215 ETNPPLQ8TBG4 499 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 GAB3Q8WWW8 586 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 SMOC2Q9H3U7 446 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 C6orf50Q9HD87 102 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 MYBPHLA2RUH7 354 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 POTEMA6NI47 508 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 SYN3O14994 580 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 CHADO15335 359 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 EDIL3O43854 480 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 MARK3P27448 753 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 PTENP60484 403 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 KIZQ2M2Z5 673 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 CASC1Q6TDU7 716 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 IRF7Q92985 503 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 EXOC4Q96A65 974 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 VPS45Q9NRW7 570 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 ADAM28Q9UKQ2 775 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 RAB23Q9ULC3 237 aa6.87□□□□□ -1.31
UBE3A-205ENST00000566215 CCDC69A6NI79 296 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 CHRNB1P11230 501 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 NFX1Q12986 1120 aaKnown RBP6.86□□□□□ -1.31
UBE3A-205ENST00000566215 PPM1JQ5JR12 505 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 ANKRD45Q5TZF3 282 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 TMEM173Q86WV6 379 aaPredicted RBP6.86□□□□□ -1.31
UBE3A-205ENST00000566215 LNX1Q8TBB1 728 aaPredicted RBP6.86□□□□□ -1.31
UBE3A-205ENST00000566215 KCNMB3Q9NPA1 279 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 DISC1Q9NRI5 854 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 FAM217BQ9NTX9 383 aaPredicted RBP6.86□□□□□ -1.31
UBE3A-205ENST00000566215 ASB3Q9Y575 518 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 R4GN57 208 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 ARL2P36404 184 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 TUSC3Q13454 348 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 TFDP1Q14186 410 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 FUT10Q6P4F1 479 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 TRAPPC12Q8WVT3 735 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 SEMA4GQ9NTN9 838 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 SPATA6Q9NWH7 488 aaPredicted RBP6.86□□□□□ -1.31
UBE3A-205ENST00000566215 PTPRDP23468 1912 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 STK36Q9NRP7 1315 aa6.86□□□□□ -1.31
UBE3A-205ENST00000566215 A0A1B0GUA9 196 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SLC26A4O43511 780 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 PLEKHA8P1O95397 391 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ITGA4P13612 1032 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CEACAM1P13688 526 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 METAP2P50579 478 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 HSP90AA2PQ14568 343 aaPredicted RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 PTPAQ15257 358 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 APOA5Q6Q788 366 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 APBB1IPQ7Z5R6 666 aaPredicted RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 HOMER1Q86YM7 354 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 NPAS3Q8IXF0 933 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 GSTCDQ8NEC7 633 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SPATA18Q8TC71 538 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 LSG1Q9H089 658 aaKnown RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 GABBR1Q9UBS5 961 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 STK24Q9Y6E0 443 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 XIRP2A4UGR9 3374 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 PRC1O43663 620 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 TSPAN1O60635 241 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ATG13O75143 517 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 VTNP04004 478 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ADRB2P07550 413 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 DDX6P26196 483 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CHMP4BP1P59074 171 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 IGBP1P78318 339 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 TMEM266Q2M3C6 531 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 DCAF4L1Q3SXM0 396 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 MFSD6LQ8IWD5 586 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 DDX27Q96GQ7 796 aaKnown RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 MYL10Q9BUA6 226 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 HCSTQ9UBK5 93 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms