RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 TYW1Q9NV66 732 aaKnown RBP16.97■□□□□ 0.31
CDH11-209ENST00000564317 CTNND2Q9UQB3 1225 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 CEP290O15078 2479 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 TRIM49BA6NDI0 452 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 CLIC2O15247 247 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 CLDN3O15551 220 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 EFCAB14O75071 495 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 ZNF623O75123 536 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 MATR3P43243 847 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDH11-209ENST00000564317 RAB27AP51159 221 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 TYRO3Q06418 890 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 SEZ6Q53EL9 994 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 CENPPQ6IPU0 288 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 SASS6Q6UVJ0 657 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 HS2ST1Q7LGA3 356 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 MRPL10Q7Z7H8 261 aaKnown RBP16.96■□□□□ 0.31
CDH11-209ENST00000564317 TMEM192Q8IY95 271 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 MLKLQ8NB16 471 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 NELFBQ8WX92 580 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 POMGNT1Q8WZA1 660 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 LPPQ93052 612 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 P2RX5Q93086 422 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.31
CDH11-209ENST00000564317 MED15Q96RN5 788 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 FUCA2Q9BTY2 467 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
CDH11-209ENST00000564317 PCIF1Q9H4Z3 704 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 RNF19AQ9NV58 838 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
CDH11-209ENST00000564317 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.3
CDH11-209ENST00000564317 TNRC18O15417 2968 aaPredicted RBP16.95■□□□□ 0.3
CDH11-209ENST00000564317 PDXKO00764 312 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 PSMA7O14818 248 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 MEFVO15553 781 aaPredicted RBP16.95■□□□□ 0.3
CDH11-209ENST00000564317 AMHP03971 560 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 GARTP22102 1010 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 CCNE1P24864 410 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 TNFSF9P41273 254 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 KCNJ6P48051 423 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 STX17P56962 302 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 OSTNP61366 133 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 STIM1Q13586 685 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 STX1AQ16623 288 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 SLFN12LQ6IEE8 588 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 C11orf57Q6ZUT1 292 aaPredicted RBP16.95■□□□□ 0.3
CDH11-209ENST00000564317 C12orf56Q8IXR9 622 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 THNSL1Q8IYQ7 743 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 RNF169Q8NCN4 708 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 SAAL1Q96ER3 474 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
CDH11-209ENST00000564317 APOL6Q9BWW8 343 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 PRO3102Q9H379 93 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 SNTG2Q9NY99 539 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 AGO2Q9UKV8 859 aaKnown RBP16.95■□□□□ 0.3
CDH11-209ENST00000564317 PTPRSQ13332 1948 aa16.95■□□□□ 0.3
CDH11-209ENST00000564317 GOLGA8IPA6NC78 632 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 GOLGA8JA6NMD2 632 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 OGTO15294 1046 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
CDH11-209ENST00000564317 LETM1O95202 739 aaPredicted RBP16.94■□□□□ 0.3
CDH11-209ENST00000564317 NR3C1P04150 777 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 FGFR1P11362 822 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 AKAP5P24588 427 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 BMP8BP34820 402 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 PPP1R2P41236 205 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 GRM5P41594 1212 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 GATMP50440 423 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 CYP2J2P51589 502 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
CDH11-209ENST00000564317 PAK1Q13153 545 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 TTI2Q6NXR4 508 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 AGMOQ6ZNB7 445 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 APBB1IPQ7Z5R6 666 aaPredicted RBP16.94■□□□□ 0.3
CDH11-209ENST00000564317 NPAS4Q8IUM7 802 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 TOP1MTQ969P6 601 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 CXCL16Q9H2A7 254 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 ELAC1Q9H777 363 aaKnown RBP16.94■□□□□ 0.3
CDH11-209ENST00000564317 DMAC2Q9NW81 257 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 TMEM161AQ9NX61 479 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 CGNQ9P2M7 1197 aaKnown RBP16.94■□□□□ 0.3
CDH11-209ENST00000564317 COL4A6Q14031 1691 aa16.94■□□□□ 0.3
CDH11-209ENST00000564317 RECQL4O94761 1208 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 UPP2O95045 317 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 STAG3L1P0CL83 205 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 SKIP12755 728 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 ITGA4P13612 1032 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 ACOT2P49753 483 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 NFIL3Q16649 462 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 CLLU1OSQ5K130 101 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 FAM109BQ6ICB4 259 aaPredicted RBP16.93■□□□□ 0.3
CDH11-209ENST00000564317 FAM117BQ6P1L5 589 aa16.93■□□□□ 0.3
CDH11-209ENST00000564317 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
CDH11-209ENST00000564317 DUSP9Q99956 384 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms