RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ZNF568Q3ZCX4 644 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 FAM117BQ6P1L5 589 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 CASD1Q96PB1 797 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 TSPAN18Q96SJ8 248 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 EIF2AQ9BY44 585 aaKnown RBP18.28■□□□□ 0.52
RNF40-206ENST00000564260 NKX2-4Q9H2Z4 354 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 RNF19AQ9NV58 838 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 EXOC1Q9NV70 894 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 RMND1Q9NWS8 449 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 PTPRSQ13332 1948 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 TBKBP1A7MCY6 615 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 ABLIM1O14639 778 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 OFD1O75665 1012 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 RHOBTB3O94955 611 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 SMC2O95347 1197 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 EDN1P05305 212 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 LAG3P18627 525 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 LIG1P18858 919 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 DPYDQ12882 1025 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 NOMO2Q5JPE7 1267 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 CLLU1OSQ5K130 101 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 AGMOQ6ZNB7 445 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 EPM2AIP1Q7L775 607 aaPredicted RBP18.27■□□□□ 0.52
RNF40-206ENST00000564260 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.52
RNF40-206ENST00000564260 P2RX5Q93086 422 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 LRCH3Q96II8 777 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 GSDMAQ96QA5 445 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 TCHPQ9BT92 498 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 CCDC94Q9BW85 323 aaPredicted RBP18.27■□□□□ 0.52
RNF40-206ENST00000564260 CDT1Q9H211 546 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
RNF40-206ENST00000564260 MYH11P35749 1972 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 TTLL13PA6NNM8 815 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 KLRC4O43908 158 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 RPN1P04843 607 aaKnown RBP18.26■□□□□ 0.51
RNF40-206ENST00000564260 FGFR1P11362 822 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 GARTP22102 1010 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 PPM1AP35813 382 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
RNF40-206ENST00000564260 RNF169Q8NCN4 708 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 SPATA20Q8TB22 786 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 GOLGA5Q8TBA6 731 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 ZNF507Q8TCN5 953 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 TMEM174Q8WUU8 243 aa18.26■□□□□ 0.51
RNF40-206ENST00000564260 NXF3Q9H4D5 531 aaKnown RBP18.26■□□□□ 0.51
RNF40-206ENST00000564260 A0A0B4J269 797 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 NR1I2O75469 434 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 MYOGP15173 224 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 BMPR1AP36894 532 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 EEF1DP3Q658K8 133 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 HELQQ8TDG4 1101 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 C11orf84Q9BUA3 381 aaPredicted RBP18.25■□□□□ 0.51
RNF40-206ENST00000564260 BLZF1Q9H2G9 400 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 PCDHB12Q9Y5F1 795 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 CHD9Q3L8U1 2897 aa18.25■□□□□ 0.51
RNF40-206ENST00000564260 ARL5CA6NH57 179 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 OGTO15294 1046 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
RNF40-206ENST00000564260 LDHAP00338 332 aaKnown RBP18.24■□□□□ 0.51
RNF40-206ENST00000564260 CLTAP09496 248 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 LINC00271P0C7V0 271 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 GRIK3Q13003 919 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 KMT5BQ4FZB7 885 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 ZC2HC1CQ53FD0 456 aaPredicted RBP18.24■□□□□ 0.51
RNF40-206ENST00000564260 XKR4Q5GH76 650 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 CD302Q8IX05 232 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 TMEM192Q8IY95 271 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 GRAMD1CQ8IYS0 662 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 SYCP3Q8IZU3 236 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 ACAP3Q96P50 834 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 RPS6KC1Q96S38 1066 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 TMEM175Q9BSA9 504 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 GBP3Q9H0R5 595 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 TTYH1Q9H313 450 aaPredicted RBP18.24■□□□□ 0.51
RNF40-206ENST00000564260 LMCD1Q9NZU5 365 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
RNF40-206ENST00000564260 MRPL42Q9Y6G3 142 aaKnown RBP18.24■□□□□ 0.51
RNF40-206ENST00000564260 GADD45BO75293 160 aaPredicted RBP18.23■□□□□ 0.51
RNF40-206ENST00000564260 RECQL4O94761 1208 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 MYBP10242 640 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 POU3F3P20264 500 aaPredicted RBP18.23■□□□□ 0.51
RNF40-206ENST00000564260 PPP1R2P41236 205 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 CASP5P51878 434 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 UBE3AQ05086 875 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 EPC2Q52LR7 807 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 COBLL1Q53SF7 1204 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 HS2ST1Q7LGA3 356 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 CDR2LQ86X02 465 aaPredicted RBP18.23■□□□□ 0.51
RNF40-206ENST00000564260 LPPQ93052 612 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 LMAN2LQ9H0V9 348 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 CWH43Q9H720 699 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 KIAA1586Q9HCI6 787 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 TYW1Q9NV66 732 aaKnown RBP18.23■□□□□ 0.51
RNF40-206ENST00000564260 TBC1D13Q9NVG8 400 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 TBC1D7Q9P0N9 293 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 PARP2Q9UGN5 583 aa18.23■□□□□ 0.51
RNF40-206ENST00000564260 H3BNC9 293 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 RNASELQ05823 741 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms