RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 CES5AQ6NT32 575 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 CYP26C1Q6V0L0 522 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 UROC1Q96N76 676 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 GAD1Q99259 594 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
SNX29-203ENST00000564111 MEIS3P2A8K0S8 358 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 E9PMD0 336 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 RBAK-RBAKDNI3L0D1 243 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 NRP1O14786 923 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 B4GALT5O43286 388 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNX29-203ENST00000564111 PBX3P40426 434 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 STRN3Q13033 797 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 IL17AQ16552 155 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 C1orf186Q6ZWK4 172 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 SNX21Q969T3 373 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 RIPOR3Q96MK2 946 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 APOL6Q9BWW8 343 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 TOPORSQ9NS56 1045 aaPredicted RBP16.31■□□□□ 0.2
SNX29-203ENST00000564111 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 BRWD1Q9NSI6 2320 aa16.31■□□□□ 0.2
SNX29-203ENST00000564111 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 DDHD2O94830 711 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 OR1G1P47890 313 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 GLUD2P49448 558 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 SCNN1GP51170 649 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 TUSC3Q13454 348 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 KYAT1Q16773 422 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 LONRF3Q496Y0 759 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 ZNF280BQ86YH2 543 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 HDAC7Q8WUI4 952 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 SUSD6Q92537 303 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 PHF7Q9BWX1 381 aaPredicted RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 LARSQ9P2J5 1176 aaKnown RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 BARX2Q9UMQ3 279 aaPredicted RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 NR2E1Q9Y466 385 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 USP15Q9Y4E8 981 aaPredicted RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 A0A087WWV3 80 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 PLA2G4BP0C869 781 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 MCF2P10911 925 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 PLS3P13797 630 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 NPTX2P47972 431 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 PEX3P56589 373 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 DLX2Q07687 328 aaPredicted RBP16.3■□□□□ 0.2
SNX29-203ENST00000564111 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
SNX29-203ENST00000564111 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.24e-7■■■■■ 133.7
SNX29-203ENST00000564111 PP2D1A8MPX8 630 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 PER2O15055 1255 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 ADH1AP07327 375 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 CLUL1Q15846 466 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 PNMA5Q96PV4 448 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 NTPCRQ9BSD7 190 aaKnown RBP16.29■□□□□ 0.2
SNX29-203ENST00000564111 CCSER1Q9C0I3 900 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 SFXN1Q9H9B4 322 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 PCDHGC5Q9Y5F6 944 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 SSBP05455 408 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNX29-203ENST00000564111 THP07101 528 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 COL9A1P20849 921 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 GRM5P41594 1212 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 RUSC1Q9BVN2 902 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 RHOBTB2Q9BYZ6 727 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 SLC38A7Q9NVC3 462 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
SNX29-203ENST00000564111 DCXO43602 365 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 BRD1O95696 1058 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 SLC12A3P55017 1021 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 HSP90AA2PQ14568 343 aaPredicted RBP16.28■□□□□ 0.2
SNX29-203ENST00000564111 CBX2Q14781 532 aaPredicted RBP16.28■□□□□ 0.2
SNX29-203ENST00000564111 SF3A1Q15459 793 aaKnown RBP16.28■□□□□ 0.2
SNX29-203ENST00000564111 TMEM31Q5JXX7 168 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 ZPBP2Q6X784 338 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 RNF168Q8IYW5 571 aaPredicted RBP16.28■□□□□ 0.2
SNX29-203ENST00000564111 SLC22A17Q8WUG5 538 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 ADAM7Q9H2U9 754 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 MARCH5Q9NX47 278 aa16.28■□□□□ 0.2
SNX29-203ENST00000564111 LOC730098B7Z3J9 87 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 GPR37L1O60883 481 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 RECQL4O94761 1208 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 LIG1P18858 919 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 DSG1Q02413 1049 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
SNX29-203ENST00000564111 USP41Q3LFD5 358 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 ZNF568Q3ZCX4 644 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 KIAA1841Q6NSI8 718 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 CMASQ8NFW8 434 aaPredicted RBP16.27■□□□□ 0.2
SNX29-203ENST00000564111 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 BCL7CQ8WUZ0 217 aaPredicted RBP16.27■□□□□ 0.2
SNX29-203ENST00000564111 TSPAN18Q96SJ8 248 aa16.27■□□□□ 0.2
SNX29-203ENST00000564111 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms