RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SMG7Q92540 1137 aaKnown RBP20.78■□□□□ 0.92
NME3-204ENST00000563498 ZNF707Q96C28 371 aaPredicted RBP20.78■□□□□ 0.92
NME3-204ENST00000563498 ZFP42Q96MM3 310 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 MIOSQ9NXC5 875 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 ZDHHC7Q9NXF8 308 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 FNIP2Q9P278 1114 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 HES2Q9Y543 173 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 INO80B-WBP1J3KQ70 363 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 RFPL2O75678 378 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 SLITRK3O94933 977 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 SRFP11831 508 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 CYP4A11Q02928 519 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 SCRN1Q12765 414 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 AMHR2Q16671 573 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 ADSSL1Q8N142 457 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 SLC44A3Q8N4M1 653 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 OXER1Q8TDS5 423 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 CPB2Q96IY4 423 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 TRIM6Q9C030 488 aaPredicted RBP20.77■□□□□ 0.92
NME3-204ENST00000563498 PDRG1Q9NUG6 133 aa20.77■□□□□ 0.92
NME3-204ENST00000563498 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.77■□□□□ 0.921e-9■■■■■ 33.5
NME3-204ENST00000563498 TDRD15B5MCY1 1934 aaKnown RBP20.76■□□□□ 0.91
NME3-204ENST00000563498 KRBA1A5PL33 1030 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 F8W810 466 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 DGAT1O75907 488 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 CFHP08603 1231 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 ARF4P18085 180 aaPredicted RBP20.76■□□□□ 0.91
NME3-204ENST00000563498 CREMQ03060 361 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 USP41Q3LFD5 358 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 TPH2Q8IWU9 490 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 GSTCDQ8NEC7 633 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 RSAD2Q8WXG1 361 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 MYADMQ96S97 322 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 HSD17B14Q9BPX1 270 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 NT5C3AQ9H0P0 336 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 SEMA4AQ9H3S1 761 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 NXF3Q9H4D5 531 aaKnown RBP20.76■□□□□ 0.91
NME3-204ENST00000563498 ANKEF1Q9NU02 776 aa20.76■□□□□ 0.91
NME3-204ENST00000563498 TGM5O43548 720 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 ARL2P36404 184 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 GRIK3Q13003 919 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 CAPSQ13938 189 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 FUT10Q6P4F1 479 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 LILRA6Q6PI73 481 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 ERMP1Q7Z2K6 904 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 ASAP3Q8TDY4 903 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 GPR62Q9BZJ7 368 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 PRKD2Q9BZL6 878 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 PIDD1Q9HB75 910 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 ADAM28Q9UKQ2 775 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 GVINP1Q7Z2Y8 2422 aa20.75■□□□□ 0.91
NME3-204ENST00000563498 SPATA31D3P0C874 917 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 LAMP2P13473 410 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
NME3-204ENST00000563498 PHLDB3Q6NSJ2 640 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 SLC27A1Q6PCB7 646 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 SPATA31D4Q6ZUB0 917 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 PALB2Q86YC2 1186 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 EIF2AK1Q9BQI3 630 aaKnown RBP20.74■□□□□ 0.91
NME3-204ENST00000563498 APOL6Q9BWW8 343 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 GJB4Q9NTQ9 266 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 PCDHA12Q9UN75 941 aa20.74■□□□□ 0.91
NME3-204ENST00000563498 MTCL1Q9Y4B5 1905 aaKnown RBP20.74■□□□□ 0.91
NME3-204ENST00000563498 A0A1B0GUA9 196 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 ANHXE9PGG2 379 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 STK25O00506 426 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 PFKFB2O60825 505 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 RFX1P22670 979 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 GLRA2P23416 452 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 RIN2Q8WYP3 895 aaPredicted RBP20.73■□□□□ 0.91
NME3-204ENST00000563498 WASF1Q92558 559 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 B3GALT6Q96L58 329 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 TBC1D17Q9HA65 648 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 ZFP37Q9Y6Q3 630 aaPredicted RBP20.73■□□□□ 0.91
NME3-204ENST00000563498 DOCK8Q8NF50 2099 aa20.73■□□□□ 0.91
NME3-204ENST00000563498 ZMYND10O75800 440 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 MYBP10242 640 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 AKAP5P24588 427 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 HTR4Q13639 388 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 TNFRSF25Q93038 417 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 SLC2A4RGQ9NR83 387 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 CA14Q9ULX7 337 aa20.72■□□□□ 0.91
NME3-204ENST00000563498 SF3B1O75533 1304 aaKnown RBP eCLIP20.72■□□□□ 0.91
NME3-204ENST00000563498 FAM205CA6NFA0 338 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 B4GALT5O43286 388 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 TADA2AO75478 443 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 XRCC6P12956 609 aaKnown RBP eCLIP20.71■□□□□ 0.916e-11■■■■□ 23.7
NME3-204ENST00000563498 KRT2P35908 639 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 ID4P47928 161 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 RARRES1P49788 294 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 GET4Q7L5D6 327 aaPredicted RBP20.71■□□□□ 0.91
NME3-204ENST00000563498 GPR152Q8TDT2 470 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 CCDC43Q96MW1 224 aaKnown RBP20.71■□□□□ 0.91
NME3-204ENST00000563498 BRMS1Q9HCU9 246 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 ARHGEF3Q9NR81 526 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 TPCN1Q9ULQ1 816 aa20.71■□□□□ 0.91
NME3-204ENST00000563498 CTDNEP1O95476 244 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 NPTXRO95502 500 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 LMNAP02545 664 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms