RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PSMC5P62195 406 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 SPIRE1Q08AE8 756 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 NR5A1Q13285 461 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 CLLU1OSQ5K130 101 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 STPG1Q5TH74 334 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 PLA2G4FQ68DD2 849 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 NEK8Q86SG6 692 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 ZNF605Q86T29 641 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 ECHDC2Q86YB7 292 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 FAM20AQ96MK3 541 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 MKNK1Q9BUB5 465 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
SNX29-202ENST00000563308 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
SNX29-202ENST00000563308 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
SNX29-202ENST00000563308 ORC3Q9UBD5 711 aaPredicted RBP11.32□□□□□ -0.6
SNX29-202ENST00000563308 FNDC1Q4ZHG4 1894 aaPredicted RBP11.32□□□□□ -0.6
SNX29-202ENST00000563308 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
SNX29-202ENST00000563308 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
SNX29-202ENST00000563308 NPEPPSP55786 919 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 LARP1BQ659C4 914 aaKnown RBP11.31□□□□□ -0.6
SNX29-202ENST00000563308 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
SNX29-202ENST00000563308 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 NELL1Q92832 810 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 OSBPL6Q9BZF3 934 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 SFXN1Q9H9B4 322 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 SUCLA2Q9P2R7 463 aaPredicted RBP11.31□□□□□ -0.6
SNX29-202ENST00000563308 GPSM3Q9Y4H4 160 aa11.31□□□□□ -0.6
SNX29-202ENST00000563308 A0A087WZ62 844 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 A0A0U1RQF3 1178 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 WNT7AO00755 349 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 TM4SF5O14894 197 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 TBX3O15119 743 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 CCNT1O60563 726 aaKnown RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 JAK2O60674 1132 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 GPR149Q86SP6 731 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 MRPL43Q8N983 215 aaKnown RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 NELL2Q99435 816 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 FDXACB1Q9BRP7 624 aaPredicted RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 TRAIPQ9BWF2 469 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 GCOM2Q9BZD3 368 aaPredicted RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
SNX29-202ENST00000563308 PATJQ8NI35 1801 aa11.3□□□□□ -0.6
SNX29-202ENST00000563308 DSPP15924 2871 aaKnown RBP11.29□□□□□ -0.6
SNX29-202ENST00000563308 C2orf71A6NGG8 1288 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 ZBTB39O15060 712 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 ARHGAP6O43182 974 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 P4HBP07237 508 aaKnown RBP11.29□□□□□ -0.6
SNX29-202ENST00000563308 XBP1P17861 261 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 PBX3P40426 434 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 NEK4P51957 841 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 PRKCQQ04759 706 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
SNX29-202ENST00000563308 EPHA7Q15375 998 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 KANK3Q6NY19 840 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 KCNT2Q6UVM3 1135 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 CEP68Q76N32 757 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 RHPN2Q8IUC4 686 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 TMEFF1Q8IYR6 380 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 WASF1Q92558 559 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 IFT122Q9HBG6 1241 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 CACNA2D2Q9NY47 1150 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 RGL1Q9NZL6 768 aa11.29□□□□□ -0.6
SNX29-202ENST00000563308 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 BTBD18B2RXH4 712 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 HOXA2O43364 376 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 SLITRK3O94933 977 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 CXCL14O95715 111 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 KRT2P35908 639 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 PHKA2P46019 1235 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 DNM2P50570 870 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 GIT2Q14161 759 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 C4orf19Q8IY42 314 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 RNF169Q8NCN4 708 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
SNX29-202ENST00000563308 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 SCLT1Q96NL6 688 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
SNX29-202ENST00000563308 HSD17B14Q9BPX1 270 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms