RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PHOSPHO2Q8TCD6 241 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 ZBTB45Q96K62 511 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-207ENST00000563109 MSTO1Q9BUK6 570 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
RAB40C-207ENST00000563109 IPPQ9Y573 584 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 TTC3P53804 2025 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 ANKRD63C9JTQ0 380 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 PSMA7O14818 248 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 HOXA2O43364 376 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 CALUO43852 315 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-207ENST00000563109 ZNF623O75123 536 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 UPP2O95045 317 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 LETM1O95202 739 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-207ENST00000563109 EOMESO95936 686 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 ITGA4P13612 1032 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 ATP2A2P16615 1042 aaKnown RBP20.56■□□□□ 0.88
RAB40C-207ENST00000563109 GARTP22102 1010 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 HOXD13P35453 343 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 PRCPP42785 496 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 FAM189BP81408 668 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 CCDC94Q9BW85 323 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-207ENST00000563109 APOL6Q9BWW8 343 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 IKZF4Q9H2S9 585 aa20.56■□□□□ 0.88
RAB40C-207ENST00000563109 NXF3Q9H4D5 531 aaKnown RBP20.56■□□□□ 0.88
RAB40C-207ENST00000563109 A0A0B4J269 797 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 TISP43B9A030 160 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 ABLIM1O14639 778 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 KIAA0391O15091 583 aaKnown RBP20.55■□□□□ 0.88
RAB40C-207ENST00000563109 HSP90AA2PQ14568 343 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-207ENST00000563109 MRPL10Q7Z7H8 261 aaKnown RBP20.55■□□□□ 0.88
RAB40C-207ENST00000563109 SMG8Q8ND04 991 aaKnown RBP20.55■□□□□ 0.88
RAB40C-207ENST00000563109 TOP1MTQ969P6 601 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 TSG101Q99816 390 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 ZBED2Q9BTP6 218 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 UBN1Q9NPG3 1134 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 AGPAT3Q9NRZ7 376 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 DACH1Q9UI36 760 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 AGO2Q9UKV8 859 aaKnown RBP20.55■□□□□ 0.88
RAB40C-207ENST00000563109 STYXL1Q9Y6J8 313 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 CEP290O15078 2479 aa20.55■□□□□ 0.88
RAB40C-207ENST00000563109 PDXKO00764 312 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 OGTO15294 1046 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 TGFB1I1O43294 461 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 GRM5P41594 1212 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 YARSP54577 528 aaKnown RBP20.54■□□□□ 0.88
RAB40C-207ENST00000563109 NLRP12P59046 1061 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 FAM117BQ6P1L5 589 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 ZNF598Q86UK7 904 aaKnown RBP20.54■□□□□ 0.88
RAB40C-207ENST00000563109 HERC6Q8IVU3 1022 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 THNSL1Q8IYQ7 743 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 ABI1Q8IZP0 508 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 ADSSL1Q8N142 457 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 MLKLQ8NB16 471 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 DHTKD1Q96HY7 919 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-207ENST00000563109 KCTD10Q9H3F6 313 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 PARP2Q9UGN5 583 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 HES2Q9Y543 173 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 RALGAPA2Q2PPJ7 1873 aa20.54■□□□□ 0.88
RAB40C-207ENST00000563109 LDHAP00338 332 aaKnown RBP20.53■□□□□ 0.88
RAB40C-207ENST00000563109 ATF7P17544 494 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-207ENST00000563109 BMP6P22004 513 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 KLHL10Q6JEL2 608 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 GLB1LQ6UWU2 654 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 NOC3LQ8WTT2 800 aaKnown RBP20.53■□□□□ 0.88
RAB40C-207ENST00000563109 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 LPPQ93052 612 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 CBWD1Q9BRT8 395 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 HAPLN2Q9GZV7 340 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 PRO3102Q9H379 93 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 RSAD1Q9HA92 442 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 TOPORSQ9NS56 1045 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-207ENST00000563109 SNTG2Q9NY99 539 aa20.53■□□□□ 0.88
RAB40C-207ENST00000563109 A0A1W2PPC1 479 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 RECQL4O94761 1208 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 GJB5O95377 273 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 ADSSP30520 456 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 CYP2J2P51589 502 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 OSTNP61366 133 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 STX1AQ16623 288 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 C12orf56Q8IXR9 622 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 CEP120Q8N960 986 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 URGCPQ8TCY9 931 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 P2RX5Q93086 422 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 ACAP3Q96P50 834 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 YME1L1Q96TA2 773 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 PCIF1Q9H4Z3 704 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 HSPBP1Q9NZL4 362 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 CTNND2Q9UQB3 1225 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 TRAF3IP3Q9Y228 551 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 GIT1Q9Y2X7 761 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 CITO14578 2027 aa20.52■□□□□ 0.88
RAB40C-207ENST00000563109 BICDL2A1A5D9 508 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 PPP1R3GB7ZBB8 358 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 CLIC2O15247 247 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 NR3C1P04150 777 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 CLTAP09496 248 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 FGFR1P11362 822 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 CD44P16070 742 aaKnown RBP20.51■□□□□ 0.87
RAB40C-207ENST00000563109 AKAP5P24588 427 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 CCNE1P24864 410 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms