RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 NARSO43776 548 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 DGAT1O75907 488 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 LAMP2P13473 410 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 SCNN1GP51170 649 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 GRIK3Q13003 919 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 HAS1Q92839 578 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 ZNF707Q96C28 371 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 MYADMQ96S97 322 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 EIF2AQ9BY44 585 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 STK36Q9NRP7 1315 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 ANHXE9PGG2 379 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 TGM5O43548 720 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 RFPL2O75678 378 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 LYPLA2O95372 231 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 NCAPH2Q6IBW4 605 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 FUT10Q6P4F1 479 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 RSAD2Q8WXG1 361 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 SHDQ96IW2 340 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 RNF39Q9H2S5 420 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 TBC1D17Q9HA65 648 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 ANKEF1Q9NU02 776 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 RGL1Q9NZL6 768 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 ADAM28Q9UKQ2 775 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 SIT1Q9Y3P8 196 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 SPTBN4Q9H254 2564 aa17.51■□□□□ 0.39
HERPUD1-205ENST00000562914 MBTD1Q05BQ5 628 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 SPIRE1Q08AE8 756 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 SLC27A1Q6PCB7 646 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 LILRA6Q6PI73 481 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 ZFP42Q96MM3 310 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 ARHGEF3Q9NR81 526 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 CA14Q9ULX7 337 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 KCNJ14Q9UNX9 436 aa17.5■□□□□ 0.39
HERPUD1-205ENST00000562914 SF3B1O75533 1304 aaKnown RBP eCLIP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 ZMYND10O75800 440 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 SLITRK3O94933 977 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 HNRNPA1P09651 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 HTR4Q13639 388 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 AMHR2Q16671 573 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 PDXDC1Q6P996 788 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 TPH2Q8IWU9 490 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 GPR152Q8TDT2 470 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 WASF1Q92558 559 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 CPB2Q96IY4 423 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 PRIMPOLQ96LW4 560 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 CCDC43Q96MW1 224 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 GPR62Q9BZJ7 368 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 NXF3Q9H4D5 531 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 MIOSQ9NXC5 875 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 HES2Q9Y543 173 aa17.49■□□□□ 0.39
HERPUD1-205ENST00000562914 VPS13AQ96RL7 3174 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 TADA2AO75478 443 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 XRCC6P12956 609 aaKnown RBP eCLIP17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 HOXA9P31269 272 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 ARL2P36404 184 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 CYP4A11Q02928 519 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 STK3Q13188 491 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 CAPSQ13938 189 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 GET4Q7L5D6 327 aaPredicted RBP17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 GSTCDQ8NEC7 633 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 HSD17B14Q9BPX1 270 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 DLGAP2Q9P1A6 1054 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 PCDHA12Q9UN75 941 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 ARID2Q68CP9 1835 aa17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 TDRD15B5MCY1 1934 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-205ENST00000562914 MTCL1Q9Y4B5 1905 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 FSHRP23945 695 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 STARD6P59095 220 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 ELAVL2Q12926 359 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 HSP90AA2PQ14568 343 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 LIN9Q5TKA1 542 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 MTSS1LQ765P7 747 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 RTL10Q7L3V2 364 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 EIF2AK1Q9BQI3 630 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 FBXW11Q9UKB1 542 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
HERPUD1-205ENST00000562914 F8W810 466 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms