RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 ATP2A2P16615 1042 aaKnown RBP13.94□□□□□ -0.18
CDH11-205ENST00000562882 GARTP22102 1010 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 ADSSP30520 456 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 PRCPP42785 496 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 DEFB103AP81534 67 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 NOLC1Q14978 699 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDH11-205ENST00000562882 KYAT1Q16773 422 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 ZNF568Q3ZCX4 644 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 ISM2Q6H9L7 571 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 MICAL3Q7RTP6 2002 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 NPAS4Q8IUM7 802 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 NELFCDQ8IXH7 590 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 HACE1Q8IYU2 909 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 HAPLN2Q9GZV7 340 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 CDT1Q9H211 546 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 TMEM63CQ9P1W3 806 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 LRFN2Q9ULH4 789 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 MAPK8IP1Q9UQF2 711 aa13.94□□□□□ -0.18
CDH11-205ENST00000562882 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 BIN1O00499 593 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 UPP2O95045 317 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 LETM1O95202 739 aaPredicted RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 GJB5O95377 273 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 ATF7P17544 494 aaPredicted RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 MATR3P43243 847 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH11-205ENST00000562882 STIM1Q13586 685 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 CAVIN1Q6NZI2 390 aaKnown RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 ZBTB33Q86T24 672 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 HERC6Q8IVU3 1022 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 POMGNT1Q8WZA1 660 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 DHTKD1Q96HY7 919 aaPredicted RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 IKZF4Q9H2S9 585 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 TYW1Q9NV66 732 aaKnown RBP13.93□□□□□ -0.18
CDH11-205ENST00000562882 ANKFY1Q9P2R3 1169 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 TRAF3IP3Q9Y228 551 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 ZMYM2Q9UBW7 1377 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 TTC3P53804 2025 aa13.93□□□□□ -0.18
CDH11-205ENST00000562882 CDH23Q9H251 3354 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
CDH11-205ENST00000562882 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
CDH11-205ENST00000562882 PPP1R3GB7ZBB8 358 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 TISP43B9A030 160 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 OGTO15294 1046 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 HOXA2O43364 376 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 FAM189A1O60320 539 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 DGKIO75912 1065 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
CDH11-205ENST00000562882 ITGA4P13612 1032 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 GRM5P41594 1212 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 POU5F1Q01860 360 aaKnown RBP13.92□□□□□ -0.18
CDH11-205ENST00000562882 MYBPC2Q14324 1141 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 AGMOQ6ZNB7 445 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 MLKLQ8NB16 471 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 RAD9AQ99638 391 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 MSTO1Q9BUK6 570 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 NXF3Q9H4D5 531 aaKnown RBP13.92□□□□□ -0.18
CDH11-205ENST00000562882 AGPAT3Q9NRZ7 376 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 AGO2Q9UKV8 859 aaKnown RBP13.92□□□□□ -0.18
CDH11-205ENST00000562882 GIT1Q9Y2X7 761 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 HES2Q9Y543 173 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 INSL6Q9Y581 213 aa13.92□□□□□ -0.18
CDH11-205ENST00000562882 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
CDH11-205ENST00000562882 CLTAP09496 248 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 NLRP12P59046 1061 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 HTRA4P83105 476 aaPredicted RBP13.91□□□□□ -0.18
CDH11-205ENST00000562882 HSP90AA2PQ14568 343 aaPredicted RBP13.91□□□□□ -0.18
CDH11-205ENST00000562882 NFIL3Q16649 462 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 CT47A1Q5JQC4 288 aaPredicted RBP13.91□□□□□ -0.18
CDH11-205ENST00000562882 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 RNF169Q8NCN4 708 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 ZNF689Q96CS4 500 aaPredicted RBP13.91□□□□□ -0.18
CDH11-205ENST00000562882 ACAP3Q96P50 834 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 CBWD1Q9BRT8 395 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 ZBED2Q9BTP6 218 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
CDH11-205ENST00000562882 SEMA6BQ9H3T3 888 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 SNTG2Q9NY99 539 aa13.91□□□□□ -0.18
CDH11-205ENST00000562882 MEIS3P2A8K0S8 358 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 PSMA7O14818 248 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 INPPL1O15357 1258 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 OFD1O75665 1012 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
CDH11-205ENST00000562882 AKAP5P24588 427 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 EDRF1Q3B7T1 1238 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 ZCWPW2Q504Y3 356 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 CLLU1OSQ5K130 101 aa13.9□□□□□ -0.18
CDH11-205ENST00000562882 FOXR2Q6PJQ5 311 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms