RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, human

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4A-205	ENST00000562540	ZSWIM4	Q9H7M6	989 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	POGK	Q9P215	609 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	ZKSCAN5	Q9Y2L8	839 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540		B5MCH6	92 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	SPDEF	O95238	335 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	ESRRB	O95718	433 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	PFKM	P08237	780 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	RBP3	P10745	1247 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	ITGAM	P11215	1152 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	ATP2A2	P16615	1042 aa	Known RBP	4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	MGAT1	P26572	445 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	APBA1	Q02410	837 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	MPP3	Q13368	585 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	ZBTB41	Q5SVQ8	909 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	EFCAB12	Q6NXP0	572 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	BTNL9	Q6UXG8	535 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	PASD1	Q8IV76	773 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	LILRB2	Q8N423	598 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	FAM98A	Q8NCA5	519 aa	Known RBP	4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	GAB3	Q8WWW8	586 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	MRFAP1L1	Q96HT8	127 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	CDC5L	Q99459	802 aa	Known RBP	4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	ADAM2	Q99965	735 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	LRFN3	Q9BTN0	628 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	RNF181	Q9P0P0	153 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	TLK1	Q9UKI8	766 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	FRMD4B	Q9Y2L6	1034 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540	MAP3K2	Q9Y2U5	619 aa		4.57	□□□□□ -1.68
DENND4A-205	ENST00000562540		A0A1W2PR48	441 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	PRAMEF4	O60810	478 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	GAS7	O60861	476 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	GPR15	P49685	360 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	LRRC32	Q14392	662 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	CCDC144B	Q3MJ40	725 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	CCDC178	Q5BJE1	867 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	ANKS6	Q68DC2	871 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	SLC44A3	Q8N4M1	653 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	EFHB	Q8N7U6	833 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	RNF169	Q8NCN4	708 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	CAGE1	Q8TC20	777 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	SLC9A6	Q92581	669 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	TFAP2C	Q92754	450 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	IFT57	Q9NWB7	429 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	TES	Q9UGI8	421 aa	Known RBP	4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	MSRA	Q9UJ68	235 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	USP15	Q9Y4E8	981 aa	Predicted RBP	4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	FPGT-TNNI3K	V9GXZ4	949 aa		4.56	□□□□□ -1.68
DENND4A-205	ENST00000562540	CLEC2L	P0C7M8	214 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	EGR2	P11161	476 aa	Predicted RBP	4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	SDS	P20132	328 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	PPARA	Q07869	468 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	REST	Q13127	1097 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	UBE3C	Q15386	1083 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	GLB1L2	Q8IW92	636 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	DUSP26	Q9BV47	211 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	KIAA1586	Q9HCI6	787 aa		4.55	□□□□□ -1.68
DENND4A-205	ENST00000562540	ZMYM3	Q14202	1370 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	MYADML2	A6NDP7	307 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	MARCH11	A6NNE9	402 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	PROB1	E7EW31	1015 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	LTA4H	P09960	611 aa	Known RBP	4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	FDXR	P22570	491 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	MPL	P40238	635 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	ARMC6	Q6NXE6	501 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	CHTF18	Q8WVB6	975 aa		4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	ZNF496	Q96IT1	587 aa	Predicted RBP	4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	THG1L	Q9NWX6	298 aa	Known RBP	4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	COL11A2	P13942	1736 aa	Predicted RBP	4.54	□□□□□ -1.68
DENND4A-205	ENST00000562540	MAST3	O60307	1309 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	TBKBP1	A7MCY6	615 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	CDKL5	O76039	1030 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	FOS	P01100	380 aa	Predicted RBP	4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	IGLV2-14	P01704	120 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	RGS19	P49795	217 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	KRTAP10-6	P60371	365 aa	Predicted RBP	4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	NXPE1	Q8N323	547 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	ZFP28	Q8NHY6	868 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	MDM1	Q8TC05	714 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	ORAI3	Q9BRQ5	295 aa		4.53	□□□□□ -1.68
DENND4A-205	ENST00000562540	PRSS38	A1L453	326 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	ZNF891	A8MT65	544 aa	Predicted RBP	4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	KPNA6	O60684	536 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	IGSF3	O75054	1194 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	ITGA10	O75578	1167 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	F2	P00734	622 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	CFI	P05156	583 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	BMT2	Q1RMZ1	405 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	NEU1	Q99519	415 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	PIF1	Q9H611	641 aa		4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	ALG13	Q9NP73	1137 aa	Known RBP	4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.52	□□□□□ -1.69
DENND4A-205	ENST00000562540	LCHN	A4D1U4	455 aa		4.51	□□□□□ -1.69
DENND4A-205	ENST00000562540	PPP1R12A	O14974	1030 aa	Predicted RBP	4.51	□□□□□ -1.69
DENND4A-205	ENST00000562540	TGM5	O43548	720 aa		4.51	□□□□□ -1.69
DENND4A-205	ENST00000562540	KPNA1	P52294	538 aa	Predicted RBP	4.51	□□□□□ -1.69
DENND4A-205	ENST00000562540	CHN2	P52757	468 aa		4.51	□□□□□ -1.69
DENND4A-205	ENST00000562540	MEF2A	Q02078	507 aa	Predicted RBP	4.51	□□□□□ -1.69

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