RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 PP2D1A8MPX8 630 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 F8W810 466 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 LAD1O00515 517 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLK3-205ENST00000561673 EPCAMP16422 314 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 CDC25AP30304 524 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 PRPHP41219 470 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 NAMPTP43490 491 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 GSE1Q14687 1217 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 MAPK6Q16659 721 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 DTHD1Q6ZMT9 781 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 HACE1Q8IYU2 909 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 C12orf76Q8N812 135 aaPredicted RBP11.37□□□□□ -0.59
CLK3-205ENST00000561673 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 SLC22A17Q8WUG5 538 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 TBC1D32Q96NH3 1257 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 KIFC3Q9BVG8 833 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 RAB34Q9BZG1 259 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 CCDC113Q9H0I3 377 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 C2orf40Q9H1Z8 148 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 ADAM7Q9H2U9 754 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 MARCH5Q9NX47 278 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 KLK14Q9P0G3 267 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 PARP2Q9UGN5 583 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
CLK3-205ENST00000561673 E9PMD0 336 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 H3BQV1 296 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 ACKR2O00590 384 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 EFEMP2O95967 443 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 SOD2P04179 222 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 EDN1P05305 212 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 PRKCBP05771 671 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 CNPP09543 421 aaKnown RBP11.36□□□□□ -0.59
CLK3-205ENST00000561673 LIG1P18858 919 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 KLRC2P26717 231 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 MCM2P49736 904 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 ITIH3Q06033 890 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 PRPF4BQ13523 1007 aaKnown RBP11.36□□□□□ -0.59
CLK3-205ENST00000561673 PPP2R5AQ15172 486 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 RILPL1Q5EBL4 403 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 RARS2Q5T160 578 aaKnown RBP11.36□□□□□ -0.59
CLK3-205ENST00000561673 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 CES5AQ6NT32 575 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 DEPTORQ8TB45 409 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 EDAQ92838 391 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 KIFAP3Q92845 792 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 KLHL5Q96PQ7 755 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 MMTAG2Q9BU76 263 aaKnown RBP11.36□□□□□ -0.59
CLK3-205ENST00000561673 EMILIN2Q9BXX0 1053 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 PDZD7Q9H5P4 517 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 MRPL17Q9NRX2 175 aaKnown RBP11.36□□□□□ -0.59
CLK3-205ENST00000561673 DNM3Q9UQ16 869 aa11.36□□□□□ -0.59
CLK3-205ENST00000561673 C2CD2LO14523 706 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 N4BP3O15049 544 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 NR1I2O75469 434 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 WEE2P0C1S8 567 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 SP100P23497 879 aaPredicted RBP11.35□□□□□ -0.59
CLK3-205ENST00000561673 CLCN4P51793 760 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 EFNA5P52803 228 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 ATP2C1P98194 919 aaPredicted RBP11.35□□□□□ -0.59
CLK3-205ENST00000561673 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 NT5DC1Q5TFE4 455 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 KIAA0319Q5VV43 1072 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 KCNK18Q7Z418 384 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 CABP7Q86V35 215 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 RNF168Q8IYW5 571 aaPredicted RBP11.35□□□□□ -0.59
CLK3-205ENST00000561673 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 RABGGTAQ92696 567 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 RPS6KC1Q96S38 1066 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 HERC2P3Q9BVR0 1158 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 COLEC11Q9BWP8 271 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 CXCL16Q9H2A7 254 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 POMKQ9H5K3 350 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 DZANK1Q9NVP4 752 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 SNTG2Q9NY99 539 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 SMC3Q9UQE7 1217 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 HCN4Q9Y3Q4 1203 aa11.35□□□□□ -0.59
CLK3-205ENST00000561673 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 K7ERI5 159 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 HIP1RO75146 1068 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 URODP06132 367 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 NPTX2P47972 431 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 ZXDAP98168 799 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 GRIK3Q13003 919 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 ZRSR1Q15695 479 aaKnown RBP11.34□□□□□ -0.59
CLK3-205ENST00000561673 EEF1DP3Q658K8 133 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 LARP1BQ659C4 914 aaKnown RBP11.34□□□□□ -0.59
CLK3-205ENST00000561673 RINT1Q6NUQ1 792 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 HFE2Q6ZVN8 426 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 C1orf186Q6ZWK4 172 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 DAW1Q8N136 415 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 FBXL18Q96ME1 805 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 RIPOR3Q96MK2 946 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 NECTIN4Q96NY8 510 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 PAAF1Q9BRP4 392 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 RUSC1Q9BVN2 902 aa11.34□□□□□ -0.59
CLK3-205ENST00000561673 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms