RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	ADAM9	Q13443	819 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	PPP2R5A	Q15172	486 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	GRAMD4	Q6IC98	578 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	UNQ6494/PRO21346	Q6UXR6	183 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	RAX2	Q96IS3	184 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	HIST1H2AH	Q96KK5	128 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	HIST1H2AJ	Q99878	128 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	WNT8A	Q9H1J5	351 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	KCMF1	Q9P0J7	381 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	IP6K2	Q9UHH9	426 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	WASF3	Q9UPY6	502 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	RPGRIP1L	Q68CZ1	1315 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	MYPN	Q86TC9	1320 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	DCC	P43146	1447 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	ADGRL3	Q9HAR2	1447 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	LAMC1	P11047	1609 aa		5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	COL16A1	Q07092	1604 aa	Predicted RBP	5.11	□□□□□ -1.59
LRRC28-222	ENST00000561431	DDX3X	O00571	662 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	ADGRB1	O14514	1584 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	TECPR2	O15040	1411 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	CYP1A1	P04798	512 aa	Predicted RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	OSM	P13725	252 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	IL13	P35225	146 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	THBS2	P35442	1172 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	GPR3	P46089	330 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	MSH6	P52701	1360 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	CCT2	P78371	535 aa	Known RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	CDK17	Q00537	523 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	MST1R	Q04912	1400 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	PPARA	Q07869	468 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	MOGS	Q13724	837 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	SPIDR	Q14159	915 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	ZBTB41	Q5SVQ8	909 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	AHDC1	Q5TGY3	1603 aa	Predicted RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	CXXC5	Q7LFL8	322 aa	Known RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	FMNL3	Q8IVF7	1028 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	WDR75	Q8IWA0	830 aa	Known RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	ADGRF5	Q8IZF2	1346 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	IFNL2	Q8IZJ0	200 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	PPM1N	Q8N819	430 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	AUTS2	Q8WXX7	1259 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	GPR20	Q99678	358 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	KCTD10	Q9H3F6	313 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	ZIM2	Q9NZV7	527 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	NTM	Q9P121	344 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	SAE1	Q9UBE0	346 aa	Predicted RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	DPP7	Q9UHL4	492 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	MAGEL2	Q9UJ55	1249 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	ZNF180	Q9UJW8	692 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	FBXO10	Q9UK96	956 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	CDC42EP3	Q9UKI2	254 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	THRAP3	Q9Y2W1	955 aa	Known RBP	5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	PCDHB6	Q9Y5E3	794 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	NUMBL	Q9Y6R0	609 aa		5.1	□□□□□ -1.59
LRRC28-222	ENST00000561431	NHSL1	Q5SYE7	1610 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	CDC42BPG	Q6DT37	1551 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	CCDC194	A0A1B0GVG4	234 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	E2F8	A0AVK6	867 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	PEX14	O75381	377 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	PARN	O95453	639 aa	Known RBP	5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	IL33	O95760	270 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	IL18BP	O95998	194 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	RBP3	P10745	1247 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	TNFRSF1A	P19438	455 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	RECQL	P46063	649 aa	Predicted RBP	5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	KCNQ1	P51787	676 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	SLC5A3	P53794	718 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	MCL1	Q07820	350 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	PIN1	Q13526	163 aa	Predicted RBP	5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	DGKD	Q16760	1214 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	LONRF3	Q496Y0	759 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	PITRM1	Q5JRX3	1037 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	CBARP	Q8N350	705 aa	Predicted RBP	5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	LINC00482	Q8N8I6	264 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	CDYL2	Q8N8U2	506 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	OR14C36	Q8NHC7	312 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	FNIP1	Q8TF40	1166 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	GAB3	Q8WWW8	586 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	RSAD2	Q8WXG1	361 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	DYDC2	Q96IM9	177 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	MAF1	Q9H063	256 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	KCND1	Q9NSA2	647 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	FAM184B	Q9ULE4	1060 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	GPR45	Q9Y5Y3	372 aa		5.09	□□□□□ -1.59
LRRC28-222	ENST00000561431	PHLPP1	O60346	1717 aa		5.09	□□□□□ -1.6
LRRC28-222	ENST00000561431	LRPPRC	P42704	1394 aa	Known RBP	5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431		A0A0G2JNJ9	132 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	AKAP10	O43572	662 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	NRP2	O60462	931 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	OPHN1	O60890	802 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	PPFIA4	O75335	1185 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	HMGCR	P04035	888 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	PLA2G1B	P04054	148 aa	Known RBP	5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	CHGB	P05060	677 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	ZSCAN20	P17040	1043 aa	Predicted RBP	5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	MEOX1	P50221	254 aa		5.08	□□□□□ -1.6
LRRC28-222	ENST00000561431	MLLT6	P55198	1093 aa	Predicted RBP	5.08	□□□□□ -1.6

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