RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 AMHR2Q16671 573 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 SLC44A3Q8N4M1 653 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 DTWD2Q8NBA8 298 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ZNF707Q96C28 371 aaPredicted RBP13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ZFP42Q96MM3 310 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 HSD17B14Q9BPX1 270 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ANKEF1Q9NU02 776 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ZDHHC7Q9NXF8 308 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 HES2Q9Y543 173 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ZMYM2Q9UBW7 1377 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 RFPL2O75678 378 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 SRFP11831 508 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 CAPSQ13938 189 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 USP41Q3LFD5 358 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 LILRA6Q6PI73 481 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 RSAD2Q8WXG1 361 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 MYADMQ96S97 322 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 ARID2Q68CP9 1835 aa13.15□□□□□ -0.3
CARMIL3-204ENST00000561354 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 A0A1B0GUA9 196 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 KRBA1A5PL33 1030 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 F8W810 466 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 TGM5O43548 720 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 PFKFB2O60825 505 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 CFHP08603 1231 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 LAMP2P13473 410 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 GLRA2P23416 452 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 CREMQ03060 361 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 GRIK3Q13003 919 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 ADSSL1Q8N142 457 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 WASF1Q92558 559 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 GPR62Q9BZJ7 368 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 SEMA4AQ9H3S1 761 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 ADAM28Q9UKQ2 775 aa13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
CARMIL3-204ENST00000561354 MTCL1Q9Y4B5 1905 aaKnown RBP13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 ANHXE9PGG2 379 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 SPATA31D3P0C874 917 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 MYBP10242 640 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 AKAP5P24588 427 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 RARRES1P49788 294 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 PHLDB3Q6NSJ2 640 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 SPATA31D4Q6ZUB0 917 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 ERMP1Q7Z2K6 904 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 B3GALT6Q96L58 329 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
CARMIL3-204ENST00000561354 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 STK25O00506 426 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 B4GALT5O43286 388 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 ZMYND10O75800 440 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 KRT2P35908 639 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 NR5A1Q13285 461 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 CALCRLQ16602 461 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 TTC12Q9H892 705 aaPredicted RBP13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 SLC2A4RGQ9NR83 387 aa13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
CARMIL3-204ENST00000561354 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 TADA2AO75478 443 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 NPTXRO95502 500 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 FDPSP14324 419 aaKnown RBP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 RFX1P22670 979 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 TUSC3Q13454 348 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 HTR4Q13639 388 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms