RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
HERC1-212ENST00000561348 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 NRDE2Q9H7Z3 1164 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 SPG21Q9NZD8 308 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 KCND2Q9NZV8 630 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 DNAJB4Q9UDY4 337 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 PCDHGC5Q9Y5F6 944 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 PHLPP2Q6ZVD8 1323 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 MYMKA6NI61 221 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 POLR2DO15514 142 aaKnown RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 TRAK2O60296 914 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 DDHD2O94830 711 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 DNAJB1P25685 340 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 NMT1P30419 496 aaKnown RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 IRS1P35568 1242 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 AFMP43652 599 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 LIG4P49917 911 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 TFF2Q03403 129 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 FAM187BQ17R55 369 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 TIGD5Q53EQ6 642 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 ZC2HC1CQ53FD0 456 aaPredicted RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 ATL3Q6DD88 541 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 SFR1Q86XK3 245 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 SPPL3Q8TCT6 385 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 TRAIPQ9BWF2 469 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 MRPL44Q9H9J2 332 aaKnown RBP11.11□□□□□ -0.63
HERC1-212ENST00000561348 C17orf75Q9HAS0 396 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 UBN1Q9NPG3 1134 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 KANSL3Q9P2N6 904 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 THEGQ9P2T0 379 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 KCNG1Q9UIX4 513 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 COL4A6Q14031 1691 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 MYO7AQ13402 2215 aa11.11□□□□□ -0.63
HERC1-212ENST00000561348 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 A0A1B0GVL5 298 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 H0YCG3 227 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 HNRNPDLO14979 420 aaKnown RBP11.1□□□□□ -0.63
HERC1-212ENST00000561348 PER2O15055 1255 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 NR1I2O75469 434 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 RECQL4O94761 1208 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 GCNT3O95395 438 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 ALDH2P05091 517 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 LINC00271P0C7V0 271 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
HERC1-212ENST00000561348 PPM1AP35813 382 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 NRIP1P48552 1158 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 SLC11A1P49279 550 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
HERC1-212ENST00000561348 ERVFC1P60507 584 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 CLUL1Q15846 466 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 DCAF4L1Q3SXM0 396 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 NAALADL2Q58DX5 795 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 HERC4Q5GLZ8 1057 aaPredicted RBP11.1□□□□□ -0.63
HERC1-212ENST00000561348 GLRA4Q5JXX5 417 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 TAS1R3Q7RTX0 852 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 CEP120Q8N960 986 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 IQUBQ8NA54 791 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 LEO1Q8WVC0 666 aaPredicted RBP11.1□□□□□ -0.63
HERC1-212ENST00000561348 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 AUTS2Q8WXX7 1259 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 P2RX5Q93086 422 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 PPP2R3CQ969Q6 453 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 TCF25Q9BQ70 676 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
HERC1-212ENST00000561348 BLZF1Q9H2G9 400 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 TMEM134Q9H6X4 195 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 TLE6Q9H808 572 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 PANK4Q9NVE7 773 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 CLDND1Q9NY35 253 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 GIT1Q9Y2X7 761 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 PLXNA4Q9HCM2 1894 aa11.1□□□□□ -0.63
HERC1-212ENST00000561348 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 C2CD2LO14523 706 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 CLDN3O15551 220 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 B4GALT3O60512 393 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 GALTP07902 379 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 MAPTP10636 758 aaKnown RBP11.09□□□□□ -0.63
HERC1-212ENST00000561348 KCNA5P22460 613 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 CASP1P29466 404 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 ASIC1P78348 528 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 NUCB2P80303 420 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms