RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 CD207Q9UJ71 328 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 CDH22Q9UJ99 828 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 INPP5FQ9Y2H2 1132 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 PPME1Q9Y570 386 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 PCDHB2Q9Y5E7 798 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 TECTAO75443 2155 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 B4GALT5O43286 388 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 NCK2O43639 380 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 GAS2O43903 313 aaKnown RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 USO1O60763 962 aaKnown RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 EIF5BO60841 1220 aaKnown RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ZNF623O75123 536 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ZC3H11AO75152 810 aaKnown RBP eCLIP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 OFD1O75665 1012 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 EYA4O95677 639 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 EDN1P05305 212 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 OR52Z1P0C646 297 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 GLRA2P23416 452 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ARL2P36404 184 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 TECP42680 631 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 PTENP60484 403 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 HMGN5P82970 282 aaKnown RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 PRR20EP86478 221 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 PRR20CP86479 221 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 PRR20DP86480 221 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 PRR20BP86481 221 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 PRR20AP86496 221 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 MBTD1Q05BQ5 628 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 KCNC3Q14003 757 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ECM1Q16610 540 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 OTUD6AQ7L8S5 288 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 SRGAP1Q7Z6B7 1085 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 CATSPER3Q86XQ3 398 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ZNF280BQ86YH2 543 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 NOSTRINQ8IVI9 506 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 C4orf32Q8N8J7 132 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 MICAL1Q8TDZ2 1067 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 TCP11Q8WWU5 503 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ZSCAN31Q96LW9 406 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 TCF25Q9BQ70 676 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 EIF2AQ9BY44 585 aaKnown RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 INO80BQ9C086 356 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 POLR3FQ9H1D9 316 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 FOXP1Q9H334 677 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ENTPD7Q9NQZ7 604 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ANKEF1Q9NU02 776 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 SPG21Q9NZD8 308 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 LZTS1Q9Y250 596 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 ZNF318Q5VUA4 2279 aa8.23□□□□□ -1.09
ZEB1-223ENST00000561304 LILRB3O75022 631 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 DGAT1O75907 488 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 DDHD2O94830 711 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 ARF4P18085 180 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 PPM1AP35813 382 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 SLC11A1P49279 550 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 RAB27AP51159 221 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 COASYQ13057 564 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 RABEP1Q15276 862 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 SAFBQ15424 915 aaKnown RBP eCLIP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 NOMO2Q5JPE7 1267 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 LLGL2Q6P1M3 1020 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 MAEAQ7L5Y9 396 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 MRPL10Q7Z7H8 261 aaKnown RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 CDR2LQ86X02 465 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 ADHFE1Q8IWW8 467 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 LRFN3Q9BTN0 628 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 MRPL9Q9BYD2 267 aaKnown RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 GBP3Q9H0R5 595 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 ZBP1Q9H171 429 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 NXF3Q9H4D5 531 aaKnown RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 POLD4Q9HCU8 107 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 TUFT1Q9NNX1 390 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 USP15Q9Y4E8 981 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 HES2Q9Y543 173 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 IPPQ9Y573 584 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 PCDHB6Q9Y5E3 794 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 DOCK8Q8NF50 2099 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 PP2D1A8MPX8 630 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 F8W810 466 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 INO80B-WBP1J3KQ70 363 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 ERLIN2O94905 339 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 POMCP01189 267 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 GALTP07902 379 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 NCLP19338 710 aaKnown RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 U2AF2P26368 475 aaKnown RBP eCLIP8.22□□□□□ -1.097e-7■■■■■ 29.9
ZEB1-223ENST00000561304 MXD4Q14582 209 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 IL17AQ16552 155 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 SYCE2Q6PIF2 218 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 GLB1LQ6UWU2 654 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 EXOC8Q8IYI6 725 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 FAM184AQ8NB25 1140 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 SUSD6Q92537 303 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms