RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 DCAF4L1Q3SXM0 396 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 TIGD5Q53EQ6 642 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 ZNF280BQ86YH2 543 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 STAMQ92783 540 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 SNTG2Q9NY99 539 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 FAM13BQ9NYF5 915 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 ATG2AQ2TAZ0 1938 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 H0YCG3 227 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 B4GALT3O60512 393 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 HARSP12081 509 aaKnown RBP21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 PPM1AP35813 382 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 CAMK1Q14012 370 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 E2F4Q16254 413 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 RESP18Q5W5W9 173 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 FAM178BQ8IXR5 827 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 FAM193BQ96PV7 902 aaPredicted RBP21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 TCHPQ9BT92 498 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 SPG21Q9NZD8 308 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 KANSL3Q9P2N6 904 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 GDAQ9Y2T3 454 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 POLR2DO15514 142 aaKnown RBP21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 RECQL4O94761 1208 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 DDHD2O94830 711 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 IDEP14735 1019 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 NMT1P30419 496 aaKnown RBP21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 IRS1P35568 1242 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 NUCB2P80303 420 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 TPRNQ4KMQ1 711 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 APBB1IPQ7Z5R6 666 aaPredicted RBP21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 ZBTB33Q86T24 672 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 SFR1Q86XK3 245 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 SLC39A11Q8N1S5 342 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 IQUBQ8NA54 791 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 DNAJC19Q96DA6 116 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 BICD1Q96G01 975 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 RPS6KC1Q96S38 1066 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 CDT1Q9H211 546 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 NSUN3Q9H649 340 aaKnown RBP21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 MIOSQ9NXC5 875 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 ANKFY1Q9P2R3 1169 aa21.86■■□□□ 1.09
TSPAN3-210ENST00000561277 SLC11A1P49279 550 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 TCEAL5Q5H9L2 206 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 TMEM173Q86WV6 379 aaPredicted RBP21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 CEP120Q8N960 986 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 SLC17A8Q8NDX2 589 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 FIZ1Q96SL8 496 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 TLR9Q9NR96 1032 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 PCDHGC5Q9Y5F6 944 aa21.85■■□□□ 1.09
TSPAN3-210ENST00000561277 INPPL1O15357 1258 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 GALTP07902 379 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 OSTNP61366 133 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 PLCB3Q01970 1234 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 KRT17Q04695 432 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 UBE3AQ05086 875 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 MPZL3Q6UWV2 235 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 MRPS27Q92552 414 aaKnown RBP21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 TMEM169Q96HH4 297 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 ZBTB45Q96K62 511 aaPredicted RBP21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 TNMDQ9H2S6 317 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 CUEDC2Q9H467 287 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 GDPD2Q9HCC8 539 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 PTPRHQ9HD43 1115 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 PUF60Q9UHX1 559 aaKnown RBP21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 TBX20Q9UMR3 447 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 MYO7AQ13402 2215 aa21.84■■□□□ 1.09
TSPAN3-210ENST00000561277 SPTBN5Q9NRC6 3674 aaKnown RBP21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 TCHHQ07283 1943 aa21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 MATR3P43243 847 aaKnown RBP eCLIP21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 GSTCDQ8NEC7 633 aa21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 MICAL1Q8TDZ2 1067 aa21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 SCAND2PQ9GZW5 306 aaPredicted RBP21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 KBTBD4Q9NVX7 518 aa21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 TBC1D7Q9P0N9 293 aa21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 KCNH3Q9ULD8 1083 aa21.83■■□□□ 1.09
TSPAN3-210ENST00000561277 TDRD15B5MCY1 1934 aaKnown RBP21.83■■□□□ 1.08
TSPAN3-210ENST00000561277 TOM1L1O75674 476 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 PROZP22891 400 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 OR1G1P47890 313 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 LIG4P49917 911 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 ERVFC1P60507 584 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 ZC2HC1CQ53FD0 456 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 ZPBP2Q6X784 338 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 BCL7CQ8WUZ0 217 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 CXCL16Q9H2A7 254 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 MRPL44Q9H9J2 332 aaKnown RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 THEGQ9P2T0 379 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 PRG3Q9Y2Y8 225 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 A0A0C4DFX4 3053 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 ABLIM1O14639 778 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 HNRNPDLO14979 420 aaKnown RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 MCF2P10911 925 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 GAP43P17677 238 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 GRIK3Q13003 919 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 NOLC1Q14978 699 aaKnown RBP eCLIP21.82■■□□□ 1.084e-6■□□□□ 8.2
TSPAN3-210ENST00000561277 HERC4Q5GLZ8 1057 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 COLGALT2Q8IYK4 626 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 TCF25Q9BQ70 676 aa21.82■■□□□ 1.08
TSPAN3-210ENST00000561277 TMEM175Q9BSA9 504 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms