RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PROZP22891 400 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 PRKCIP41743 596 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 STAT1P42224 750 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 MATR3P43243 847 aaKnown RBP eCLIP18.57■□□□□ 0.56
HDDC3-206ENST00000561036 SP3Q02447 781 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 MBTD1Q05BQ5 628 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 MCL1Q07820 350 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 MFSD10Q14728 455 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 ASTE1Q2TB18 679 aaPredicted RBP18.57■□□□□ 0.56
HDDC3-206ENST00000561036 ZNF410Q86VK4 478 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 KAT2BQ92831 832 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 CCDC127Q96BQ5 260 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 ZBTB45Q96K62 511 aaPredicted RBP18.57■□□□□ 0.56
HDDC3-206ENST00000561036 HAPLN2Q9GZV7 340 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 DEF6Q9H4E7 631 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 DNAJC12Q9UKB3 198 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 AKT3Q9Y243 479 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 REXO2Q9Y3B8 237 aaKnown RBP18.57■□□□□ 0.56
HDDC3-206ENST00000561036 ZSWIM8A7E2V4 1837 aa18.57■□□□□ 0.56
HDDC3-206ENST00000561036 RBAK-RBAKDNI3L0D1 243 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 INO80B-WBP1J3KQ70 363 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 OGTO15294 1046 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 AKR1B10O60218 316 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ZEB2O60315 1214 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ZC3H11AO75152 810 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 EDN1P05305 212 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 SMIM10L2AP0DMW4 78 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 SMIM10L2BP0DMW5 78 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 FLT3LGP49771 235 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 PSEN2P49810 448 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 GPC3P51654 580 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 KIF11P52732 1056 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 NLRP11P59045 1033 aaKnown RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 NKX3-2P78367 333 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 POU5F1Q01860 360 aaKnown RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 KLHL30Q0D2K2 578 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 PRPF4BQ13523 1007 aaKnown RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 SURF1Q15526 300 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 FSCN1Q16658 493 aaKnown RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ATF7IP2Q5U623 682 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 MPZL3Q6UWV2 235 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 CRELD2Q6UXH1 353 aaPredicted RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 IRF2BP2Q7Z5L9 587 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ZNF710Q8N1W2 664 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 FBXL13Q8NEE6 735 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 FAM81BQ96LP2 452 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 FNBP1Q96RU3 617 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 INO80BQ9C086 356 aaPredicted RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ARHGAP39Q9C0H5 1083 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 HAUS4Q9H6D7 363 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 IFT122Q9HBG6 1241 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 PTPRHQ9HD43 1115 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 LUC7LQ9NQ29 371 aaKnown RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 ANKFY1Q9P2R3 1169 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 MYO1AQ9UBC5 1043 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 TNFSF13BQ9Y275 285 aa18.56■□□□□ 0.56
HDDC3-206ENST00000561036 R3HCC1Q9Y3T6 440 aaKnown RBP18.56■□□□□ 0.56
HDDC3-206ENST00000561036 SMIM35A0A1B0GVV1 85 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 MBLAC1A4D2B0 266 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-206ENST00000561036 ABLIM1O14639 778 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 KIF5CO60282 957 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 GFPT2O94808 682 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 SOX5P35711 763 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 MAP2K2P36507 400 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 ARHGAP25P42331 645 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 AP3M2P53677 418 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 GJA9P57773 515 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 KIAA0753Q2KHM9 967 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 TDRD12Q587J7 1177 aaKnown RBP18.55■□□□□ 0.56
HDDC3-206ENST00000561036 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 C15orf39Q6ZRI6 1047 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 SRGAP1Q7Z6B7 1085 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 KIAA0319LQ8IZA0 1049 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 TRPV1Q8NER1 839 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 TCHPQ9BT92 498 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 TSGA10Q9BZW7 698 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 UPF3AQ9H1J1 476 aaKnown RBP18.55■□□□□ 0.56
HDDC3-206ENST00000561036 RBAKQ9NYW8 714 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-206ENST00000561036 GABRQQ9UN88 632 aa18.55■□□□□ 0.56
HDDC3-206ENST00000561036 CASP8AP2Q9UKL3 1982 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 F8VZ95 297 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 FAM189A1O60320 539 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 GJB1P08034 283 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 PLEKP08567 350 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-206ENST00000561036 MYL3P08590 195 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 HOXD10P28358 340 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 ACOT2P49753 483 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 VAV2P52735 878 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-206ENST00000561036 PCBP1Q15365 356 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDDC3-206ENST00000561036 KYAT1Q16773 422 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 PHLDB3Q6NSJ2 640 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 SYT10Q6XYQ8 523 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 BRSK2Q8IWQ3 736 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 LMBR1Q8WVP7 490 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 TRIB2Q92519 343 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 CGRRF1Q99675 332 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 LZTFL1Q9NQ48 299 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms