RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CYBAP13498 195 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 SLC5A1P13866 664 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 IL9P15248 144 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 CSF2RAP15509 400 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 MAPK4P31152 587 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 HIBADHP31937 336 aaKnown RBP4.76□□□□□ -1.65
HERC1-211ENST00000560983 GYG1P46976 350 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 AMPD2Q01433 879 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 SPP2Q13103 211 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 KCTD2Q14681 263 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 MFSD14CQ5VZR4 134 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 HHIPL2Q6UWX4 724 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 ASCL5Q7RTU5 278 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 PLEKHH3Q7Z736 793 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 ADGRG2Q8IZP9 1017 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 LZTR1Q8N653 840 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 LINC00482Q8N8I6 264 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 ALG3Q92685 438 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 PEX11GQ96HA9 241 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 FGD4Q96M96 766 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 NOX5Q96PH1 765 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 CRBNQ96SW2 442 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 APBA2Q99767 749 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 SPATA25Q9BR10 227 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
HERC1-211ENST00000560983 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
HERC1-211ENST00000560983 TMOD2Q9NZR1 351 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 TBX21Q9UL17 535 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 SPTBN4Q9H254 2564 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 MAST2Q6P0Q8 1798 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 ZNF521Q96K83 1311 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 MYBBP1AQ9BQG0 1328 aaKnown RBP4.75□□□□□ -1.65
HERC1-211ENST00000560983 MGAMO43451 1857 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 VPS13AQ96RL7 3174 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 C7orf72A4D263 438 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 KBTBD13C9JR72 458 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 LPXNO60711 386 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 PPM1BO75688 479 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 HSPA5P11021 654 aaKnown RBP4.75□□□□□ -1.65
HERC1-211ENST00000560983 PAMP19021 973 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 HOXA7P31268 230 aaPredicted RBP4.75□□□□□ -1.65
HERC1-211ENST00000560983 SEPHS1P49903 392 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 HMGCS2P54868 508 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 CYP4F3Q08477 520 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 PPIGQ13427 754 aaKnown RBP eCLIP4.75□□□□□ -1.65
HERC1-211ENST00000560983 CNGB1Q14028 1251 aaPredicted RBP4.75□□□□□ -1.65
HERC1-211ENST00000560983 LEXMQ3ZCV2 418 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 WWC2Q6AWC2 1192 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 CDC42EP5Q6NZY7 148 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 BMP8AQ7Z5Y6 402 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 GGNQ86UU5 652 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 CABP7Q86V35 215 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 CARFQ8N187 725 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 NPLOC4Q8TAT6 608 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 PLEKHO2Q8TD55 490 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 CFAP53Q96M91 514 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 MMP19Q99542 508 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 PLA2G12BQ9BX93 195 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 CERS4Q9HA82 394 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 RXFP1Q9HBX9 757 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 APEX2Q9UBZ4 518 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 NUDT5Q9UKK9 219 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 EMC9Q9Y3B6 208 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 RWDD3Q9Y3V2 267 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 DOCK3Q8IZD9 2030 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 TRANK1O15050 2925 aa4.75□□□□□ -1.65
HERC1-211ENST00000560983 PTPRZ1P23471 2315 aaPredicted RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 ANKRD34BA5PLL1 514 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 SEPT4O43236 478 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 CNMDO75829 334 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 HOXB7P09629 217 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 ZNF143P52747 638 aaPredicted RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 MFAP1P55081 439 aaKnown RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 HERVK_113P62684 666 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 PABPC4Q13310 644 aaKnown RBP eCLIP4.74□□□□□ -1.65
HERC1-211ENST00000560983 RRP1BQ14684 758 aaKnown RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 DPY19L1Q2PZI1 675 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 PRAMEF19Q5SWL8 479 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 NT5DC1Q5TFE4 455 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 MBLAC2Q68D91 279 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 PSRC1Q6PGN9 363 aaPredicted RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 CCDC174Q6PII3 467 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 CPNE8Q86YQ8 564 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 MIB1Q86YT6 1006 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 Q8N1Y9 231 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 FAM169BQ8N8A8 192 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 SMARCC2Q8TAQ2 1214 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 SEC16BQ96JE7 1060 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 PRRX2Q99811 253 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 BDH2Q9BUT1 245 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 LNPKQ9C0E8 428 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 BCAS3Q9H6U6 928 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 GULP1Q9UBP9 304 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 DBR1Q9UK59 544 aaKnown RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 RALYQ9UKM9 306 aaKnown RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 FAN1Q9Y2M0 1017 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 LRRFIP2Q9Y608 721 aaKnown RBP4.74□□□□□ -1.65
HERC1-211ENST00000560983 DUSP10Q9Y6W6 482 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms