RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LILRA6Q6PI73 481 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 C1orf228Q6PIY5 440 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 AGMOQ6ZNB7 445 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 RALYLQ86SE5 291 aaKnown RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 WDR5BQ86VZ2 330 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 RNF168Q8IYW5 571 aaPredicted RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 ELSPBP1Q96BH3 223 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 MCRS1Q96EZ8 462 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 B3GALT6Q96L58 329 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 MBOAT7Q96N66 472 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 DSCC1Q9BVC3 393 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 TRMT61BQ9BVS5 477 aaKnown RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 UBN1Q9NPG3 1134 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 CHST7Q9NS84 486 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 DIAPH3Q9NSV4 1193 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 NEUROG3Q9Y4Z2 214 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 PCDHA10Q9Y5I2 948 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 MAST4O15021 2626 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 DSPP15924 2871 aaKnown RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 A0A087WZ62 844 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 MEIS1O00470 390 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 TOP3BO95985 862 aaKnown RBP10.73□□□□□ -0.69
HERC1-210ENST00000560897 FOSP01100 380 aaPredicted RBP10.73□□□□□ -0.69
HERC1-210ENST00000560897 OATP04181 439 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 CEACAM1P13688 526 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 SMARCA1P28370 1054 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 PTGDRQ13258 359 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 GRM2Q14416 872 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 C19orf48Q6RUI8 117 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 CWC27Q6UX04 472 aaKnown RBP10.73□□□□□ -0.69
HERC1-210ENST00000560897 HEATR3Q7Z4Q2 680 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 ZNF410Q86VK4 478 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 COLGALT2Q8IYK4 626 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 GAB3Q8WWW8 586 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 PGBD1Q96JS3 809 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 FDXACB1Q9BRP7 624 aaPredicted RBP10.73□□□□□ -0.69
HERC1-210ENST00000560897 ZNF577Q9BSK1 485 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 ANO3Q9BYT9 981 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 SMOC1Q9H4F8 434 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 ZFP14Q9HCL3 533 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 TBC1D22BQ9NU19 505 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 WASF3Q9UPY6 502 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 TDRD15B5MCY1 1934 aaKnown RBP10.73□□□□□ -0.69
HERC1-210ENST00000560897 TICRRQ7Z2Z1 1910 aa10.73□□□□□ -0.69
HERC1-210ENST00000560897 K7ESF4 209 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 IPO5O00410 1097 aaKnown RBP10.72□□□□□ -0.69
HERC1-210ENST00000560897 CHRNB1P11230 501 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 ITGA4P13612 1032 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 SDSP20132 328 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 GDI1P31150 447 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
HERC1-210ENST00000560897 RAP1GAPP47736 663 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 PDE1AP54750 535 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 PLA2G2CQ5R387 149 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 TANGO2Q6ICL3 276 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 NIPA1Q7RTP0 329 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 RHPN2Q8IUC4 686 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 SLC7A14Q8TBB6 771 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 CSGALNACT1Q8TDX6 532 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 MSANTD3Q96H12 275 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 NLRP4Q96MN2 994 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 APOL6Q9BWW8 343 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 PLA2G2FQ9BZM2 168 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 MSRB2Q9Y3D2 182 aa10.72□□□□□ -0.69
HERC1-210ENST00000560897 SHISA7A6NL88 538 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 HYAL3O43820 417 aaPredicted RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 TADA2AO75478 443 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 SF3B1O75533 1304 aaKnown RBP eCLIP10.71□□□□□ -0.69
HERC1-210ENST00000560897 DDAH1O94760 285 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 POU2F2P09086 479 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 CCNE1P24864 410 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 AFF1P51825 1210 aaKnown RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 SETQ01105 290 aaPredicted RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 PRKCEQ02156 737 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 WDR81Q562E7 1941 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 ANKRD45Q5TZF3 282 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 TCEAL6Q6IPX3 200 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 PRSS55Q6UWB4 352 aaPredicted RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 MRPL10Q7Z7H8 261 aaKnown RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 KBTBD6Q86V97 674 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 PROSER1Q86XN7 944 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 TCEAL3Q969E4 200 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 MAP3K14Q99558 947 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 SALL3Q9BXA9 1300 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 SENP2Q9HC62 589 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 ZNF334Q9HCZ1 680 aaPredicted RBP10.71□□□□□ -0.69
HERC1-210ENST00000560897 AGPAT5Q9NUQ2 364 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 HCFC1R1Q9NWW0 138 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
HERC1-210ENST00000560897 HELZ2Q9BYK8 2649 aaKnown RBP10.71□□□□□ -0.7
HERC1-210ENST00000560897 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
HERC1-210ENST00000560897 NBEAQ8NFP9 2946 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms