RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 PRPF6O94906 941 aaKnown RBP13.26□□□□□ -0.29
IRF9-211ENST00000560852 LDHAP00338 332 aaKnown RBP13.26□□□□□ -0.29
IRF9-211ENST00000560852 KCNJ6P48051 423 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 ENPEPQ07075 957 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 HSP90AA2PQ14568 343 aaPredicted RBP13.26□□□□□ -0.29
IRF9-211ENST00000560852 ZCWPW2Q504Y3 356 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
IRF9-211ENST00000560852 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 DHTKD1Q96HY7 919 aaPredicted RBP13.26□□□□□ -0.29
IRF9-211ENST00000560852 CPB2Q96IY4 423 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 HAPLN2Q9GZV7 340 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 PLEKHA5Q9HAU0 1116 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 TBC1D7Q9P0N9 293 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 IPPQ9Y573 584 aa13.26□□□□□ -0.29
IRF9-211ENST00000560852 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.26□□□□□ -0.29
IRF9-211ENST00000560852 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 HNRNPDLO14979 420 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 OGTO15294 1046 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 PRCPP42785 496 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 LIG4P49917 911 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 DEFB103AP81534 67 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 SMAD3P84022 425 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 CCDC183Q5T5S1 534 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 MLKLQ8NB16 471 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 RAD9AQ99638 391 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 EIF2AQ9BY44 585 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 TYW1Q9NV66 732 aaKnown RBP13.25□□□□□ -0.29
IRF9-211ENST00000560852 INSL6Q9Y581 213 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 PCDHB7Q9Y5E2 793 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 TTC3P53804 2025 aa13.25□□□□□ -0.29
IRF9-211ENST00000560852 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 SCN5AQ14524 2016 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 RANBP2P49792 3224 aaKnown RBP13.24□□□□□ -0.29
IRF9-211ENST00000560852 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 MAPK13O15264 365 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 OFD1O75665 1012 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
IRF9-211ENST00000560852 CLTAP09496 248 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 NOLC1Q14978 699 aaKnown RBP eCLIP13.24□□□□□ -0.29
IRF9-211ENST00000560852 CAMK4Q16566 473 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 CMTR2Q8IYT2 770 aaKnown RBP13.24□□□□□ -0.29
IRF9-211ENST00000560852 GSTCDQ8NEC7 633 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 SYAP1Q96A49 352 aaPredicted RBP13.24□□□□□ -0.29
IRF9-211ENST00000560852 ZBTB45Q96K62 511 aaPredicted RBP13.24□□□□□ -0.29
IRF9-211ENST00000560852 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 AGPAT3Q9NRZ7 376 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 TMEM63CQ9P1W3 806 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
IRF9-211ENST00000560852 GDAQ9Y2T3 454 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
IRF9-211ENST00000560852 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 KCNE1P15382 129 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 NFKBIBQ15653 356 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 ZNF568Q3ZCX4 644 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 CRELD2Q6UXH1 353 aaPredicted RBP13.23□□□□□ -0.29
IRF9-211ENST00000560852 CD302Q8IX05 232 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
IRF9-211ENST00000560852 CLP1Q92989 425 aaKnown RBP13.23□□□□□ -0.29
IRF9-211ENST00000560852 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 TCHPQ9BT92 498 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
IRF9-211ENST00000560852 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
IRF9-211ENST00000560852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
IRF9-211ENST00000560852 EXTL3O43909 919 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 NPTXRO95502 500 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 LINC00271P0C7V0 271 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 ITGA4P13612 1032 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 CCNE1P24864 410 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 ERCC5P28715 1186 aaPredicted RBP13.22□□□□□ -0.29
IRF9-211ENST00000560852 NLRP12P59046 1061 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 SYCP3Q8IZU3 236 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 ACAP3Q96P50 834 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
IRF9-211ENST00000560852 TRIM6Q9C030 488 aaPredicted RBP13.22□□□□□ -0.29
IRF9-211ENST00000560852 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 SEMA6BQ9H3T3 888 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 NXF3Q9H4D5 531 aaKnown RBP13.22□□□□□ -0.29
IRF9-211ENST00000560852 ASB7Q9H672 318 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 RSAD1Q9HA92 442 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 CNTN3Q9P232 1028 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 PCDH10Q9P2E7 1040 aa13.22□□□□□ -0.29
IRF9-211ENST00000560852 AGO2Q9UKV8 859 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms