RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 CTSSP25774 331 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 SLC5A3P53794 718 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 EXOSC10Q01780 885 aaKnown RBP6.01□□□□□ -1.45
PSMA4-221ENST00000560842 ITKQ08881 620 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 FAM50AQ14320 339 aaKnown RBP6.01□□□□□ -1.45
PSMA4-221ENST00000560842 UBE3CQ15386 1083 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 BRDTQ58F21 947 aaPredicted RBP6.01□□□□□ -1.45
PSMA4-221ENST00000560842 Q6ZPA2 131 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 CMTM4Q8IZR5 234 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 STAG1Q8WVM7 1258 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 CLIP3Q96DZ5 547 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 FAXDC2Q96IV6 333 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 IL23AQ9NPF7 189 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 TLR9Q9NR96 1032 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 ING3Q9NXR8 418 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 GPR45Q9Y5Y3 372 aa6.01□□□□□ -1.45
PSMA4-221ENST00000560842 SHTN1A0MZ66 631 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 KRT4P19013 534 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 IARSP41252 1262 aaKnown RBP6□□□□□ -1.45
PSMA4-221ENST00000560842 ATXN1P54253 815 aaKnown RBP6□□□□□ -1.45
PSMA4-221ENST00000560842 IGBP1P78318 339 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 COL10A1Q03692 680 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 GJC2Q5T442 439 aaPredicted RBP6□□□□□ -1.45
PSMA4-221ENST00000560842 MBNL2Q5VZF2 373 aaKnown RBP6□□□□□ -1.45
PSMA4-221ENST00000560842 ABHD15Q6UXT9 468 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 GLB1L3Q8NCI6 653 aaPredicted RBP6□□□□□ -1.45
PSMA4-221ENST00000560842 RPL10LQ96L21 214 aaKnown RBP6□□□□□ -1.45
PSMA4-221ENST00000560842 MPHOSPH9Q99550 1183 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 PLA2G3Q9NZ20 509 aa6□□□□□ -1.45
PSMA4-221ENST00000560842 TNKSO95271 1327 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 NRP1O14786 923 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA12O60330 932 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 MSX2P35548 267 aaPredicted RBP5.99□□□□□ -1.45
PSMA4-221ENST00000560842 WASP42768 502 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 ANAPC15P60006 121 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 CDK17Q00537 523 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 MALLQ13021 153 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 GRM7Q14831 915 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 LILRA3Q8N6C8 439 aaPredicted RBP5.99□□□□□ -1.45
PSMA4-221ENST00000560842 HOXB13Q92826 284 aaPredicted RBP5.99□□□□□ -1.45
PSMA4-221ENST00000560842 FUBP3Q96I24 572 aaKnown RBP eCLIP5.99□□□□□ -1.45
PSMA4-221ENST00000560842 GREM2Q9H772 168 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 DDX56Q9NY93 547 aaKnown RBP5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA9Q9Y5G4 932 aaKnown RBP5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA8Q9Y5G5 932 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA7Q9Y5G6 932 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA6Q9Y5G7 932 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA3Q9Y5H0 932 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 PCDHGA2Q9Y5H1 932 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 RPTORQ8N122 1335 aa5.99□□□□□ -1.45
PSMA4-221ENST00000560842 UBE2QL1A1L167 161 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 FOXN1O15353 648 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 PHF2O75151 1096 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 PEX11BO96011 259 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 GASTP01350 101 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 FBLP22087 321 aaKnown RBP5.98□□□□□ -1.45
PSMA4-221ENST00000560842 MCAMP43121 646 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 PPP3CAQ08209 521 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 ABCB5Q2M3G0 1257 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 FAM111BQ6SJ93 734 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 TMPRSS6Q8IU80 811 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 AMOTL1Q8IY63 956 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 GPR156Q8NFN8 814 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 MTMR8Q96EF0 704 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 TTPALQ9BTX7 342 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 ACE2Q9BYF1 805 aaPredicted RBP5.98□□□□□ -1.45
PSMA4-221ENST00000560842 SLC2A4RGQ9NR83 387 aa5.98□□□□□ -1.45
PSMA4-221ENST00000560842 REXO2Q9Y3B8 237 aaKnown RBP5.98□□□□□ -1.45
PSMA4-221ENST00000560842 A0A1W2PRX2 142 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 PDGFRBP09619 1106 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 IL12RB1P42701 662 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 MST1LQ2TV78 715 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 MUM1L1Q5H9M0 696 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 KRT40Q6A162 431 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 PGM2L1Q6PCE3 622 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 RIN2Q8WYP3 895 aaPredicted RBP5.97□□□□□ -1.45
PSMA4-221ENST00000560842 JADE3Q92613 823 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 TCF25Q9BQ70 676 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 RBM12Q9NTZ6 932 aaKnown RBP5.97□□□□□ -1.45
PSMA4-221ENST00000560842 PARPBPQ9NWS1 579 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 GIT1Q9Y2X7 761 aa5.97□□□□□ -1.45
PSMA4-221ENST00000560842 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 MT-CO1P00395 513 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 MYBL2P10244 700 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 OSMP13725 252 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 GYPEP15421 78 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 BMP5P22003 454 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 CRHR1P34998 444 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 HHEXQ03014 270 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 MGAT2Q10469 447 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 MRPL49Q13405 166 aaKnown RBP5.96□□□□□ -1.46
PSMA4-221ENST00000560842 PCBP2Q15366 365 aaKnown RBP eCLIP5.96□□□□□ -1.462e-6■■□□□ 14.2
PSMA4-221ENST00000560842 CCDC142Q17RM4 750 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 Q6ZVL8 140 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 SGMS1Q86VZ5 419 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 THEMISQ8N1K5 641 aaPredicted RBP5.96□□□□□ -1.46
PSMA4-221ENST00000560842 MKS1Q9NXB0 559 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 TRPS1Q9UHF7 1281 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 SH3BP1Q9Y3L3 701 aa5.96□□□□□ -1.46
PSMA4-221ENST00000560842 KLHL33A6NCF5 533 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms