RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 GDE1Q9NZC3 331 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 CEP131Q9UPN4 1083 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 APC2O95996 2303 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 B4E1Z4 1266 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 ZNF213O14771 459 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 CYTH3O43739 400 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 ZNF623O75123 536 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 CSDE1O75534 798 aaKnown RBP12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 PRB1P04280 392 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 HOXA9P31269 272 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 OR1G1P47890 313 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 GPC3P51654 580 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 TANGO2Q6ICL3 276 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 ABHD15Q6UXT9 468 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 DEFB124Q8NES8 71 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 PI4K2BQ8TCG2 481 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 PIBF1Q8WXW3 757 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 MCRS1Q96EZ8 462 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 TRMT61BQ9BVS5 477 aaKnown RBP12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 TMEM9BQ9NQ34 198 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 CACNA1EQ15878 2313 aa12.84□□□□□ -0.35
KNSTRN-211ENST00000560673 LNP1A1A4G5 178 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 EFEMP2O95967 443 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 C8AP07357 584 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 CCNE1P24864 410 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 KIF5BP33176 963 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 NUCB1Q02818 461 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 GRM2Q14416 872 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 GPR65Q8IYL9 337 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 LRRC71Q8N4P6 559 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 B3GALT6Q96L58 329 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 SLC32A1Q9H598 525 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 RSAD1Q9HA92 442 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 PIN4Q9Y237 131 aaKnown RBP12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 MRPS23Q9Y3D9 190 aaKnown RBP12.83□□□□□ -0.36
KNSTRN-211ENST00000560673 TICRRQ7Z2Z1 1910 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 FAM221BA6H8Z2 402 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 H0Y626 953 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 AKAP3O75969 853 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 TRIM16O95361 564 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 CAVIN2O95810 425 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 POMCP01189 267 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 RPL17P18621 184 aaKnown RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 ATP4AP20648 1035 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 AFF1P51825 1210 aaKnown RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 CREB5Q02930 508 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 SCAPQ12770 1279 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 ITGB3BPQ13352 177 aaPredicted RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 USP41Q3LFD5 358 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 SWSAP1Q6NVH7 229 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 MIS18BP1Q6P0N0 1132 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 AGMOQ6ZNB7 445 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 Q6ZS52 159 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 LINC01465Q8N7H1 131 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 GCOM2Q9BZD3 368 aaPredicted RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 ZNF334Q9HCZ1 680 aaPredicted RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 RAI2Q9Y5P3 530 aa12.82□□□□□ -0.36
KNSTRN-211ENST00000560673 CCDC163A0A0D9SF12 145 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 DDX39AO00148 427 aaKnown RBP12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 NR1I2O75469 434 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 CCNE2O96020 404 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 POU2F2P09086 479 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 HOXC13P31276 330 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 GRM4Q14833 912 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 UAP1L1Q3KQV9 507 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 C1orf228Q6PIY5 440 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 CHD1LQ86WJ1 897 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 COLGALT2Q8IYK4 626 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 MSANTD3Q96H12 275 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 CCDC86Q9H6F5 360 aaKnown RBP12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 ZFP14Q9HCL3 533 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 HCFC1R1Q9NWW0 138 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 PCDHB2Q9Y5E7 798 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
KNSTRN-211ENST00000560673 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
KNSTRN-211ENST00000560673 TK2O00142 265 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms