RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 C1QTNF3-AMACRE9PGA6 284 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 CBX4O00257 560 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 TRAF5O00463 557 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 SCDO00767 359 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 HTATSF1O43719 755 aaKnown RBP5.31□□□□□ -1.56
TMOD3-207ENST00000560549 CLASP2O75122 1294 aaKnown RBP5.31□□□□□ -1.56
TMOD3-207ENST00000560549 CYP7B1O75881 506 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 ZNF888P0CJ79 500 aaPredicted RBP5.31□□□□□ -1.56
TMOD3-207ENST00000560549 C1QTNF8P60827 252 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 RBM6P78332 1123 aaKnown RBP5.31□□□□□ -1.56
TMOD3-207ENST00000560549 IL13RA1P78552 427 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 NUCB1Q02818 461 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 FAM47CQ5HY64 1035 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 PIK3R6Q5UE93 754 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 CREB3L3Q68CJ9 461 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 LRSAM1Q6UWE0 723 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 FAM124AQ86V42 546 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 KBTBD2Q8IY47 623 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 NLGN4XQ8N0W4 816 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 KLHL36Q8N4N3 616 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 LEO1Q8WVC0 666 aaPredicted RBP5.31□□□□□ -1.56
TMOD3-207ENST00000560549 AMNQ9BXJ7 453 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 API5Q9BZZ5 524 aaKnown RBP5.31□□□□□ -1.56
TMOD3-207ENST00000560549 MEGF9Q9H1U4 602 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 SAMD15Q9P1V8 674 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 ADAM29Q9UKF5 820 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 ATP8A1Q9Y2Q0 1164 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 RTL1A6NKG5 1358 aa5.31□□□□□ -1.56
TMOD3-207ENST00000560549 COL22A1Q8NFW1 1626 aaPredicted RBP5.3□□□□□ -1.56
TMOD3-207ENST00000560549 DLG5Q8TDM6 1919 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 PRAMEF25A6NGN4 478 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 ZNF891A8MT65 544 aaPredicted RBP5.3□□□□□ -1.56
TMOD3-207ENST00000560549 MMEP08473 750 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 NAT1P18440 290 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 CNGA1P29973 690 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 CSF2RBP32927 897 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 SOX5P35711 763 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 DSG1Q02413 1049 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 SURF1Q15526 300 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 CFAP100Q494V2 611 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 TMEM177Q53S58 311 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 TSHZ1Q6ZSZ6 1077 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 Q6ZUG5 572 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 KCNH5Q8NCM2 988 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 RTF1Q92541 710 aaKnown RBP5.3□□□□□ -1.56
TMOD3-207ENST00000560549 RPS6KC1Q96S38 1066 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 KATNBL1Q9H079 304 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 SMPD4Q9NXE4 827 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 ZDHHC9Q9Y397 364 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 SPATA31A3Q5VYP0 1347 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 MAP3K5Q99683 1374 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 TNS3Q68CZ2 1445 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 SLIT3O75094 1523 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 LRP6O75581 1613 aa5.3□□□□□ -1.56
TMOD3-207ENST00000560549 TRPM3Q9HCF6 1732 aaPredicted RBP5.3□□□□□ -1.56
TMOD3-207ENST00000560549 GPR42O15529 346 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 PPFIA4O75335 1185 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 FBXO21O94952 628 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 NPTXRO95502 500 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 CNOT4O95628 575 aaKnown RBP5.29□□□□□ -1.56
TMOD3-207ENST00000560549 CHGBP05060 677 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 ZBTB48P10074 688 aaPredicted RBP5.29□□□□□ -1.56
TMOD3-207ENST00000560549 PTGS1P23219 599 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 ID4P47928 161 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 AFF2P51816 1311 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 NEK4P51957 841 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 EPHB4P54760 987 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 BIRC2Q13490 618 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 DHCR24Q15392 516 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 TAF7Q15545 349 aaPredicted RBP5.29□□□□□ -1.56
TMOD3-207ENST00000560549 ZXDCQ2QGD7 858 aaPredicted RBP5.29□□□□□ -1.56
TMOD3-207ENST00000560549 HSP90AB4PQ58FF6 505 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 DLG3Q92796 817 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 ALS2Q96Q42 1657 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 MEIS3Q99687 375 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 UCKL1Q9NWZ5 548 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 B3GALT1Q9Y5Z6 326 aa5.29□□□□□ -1.56
TMOD3-207ENST00000560549 NCAPD2Q15021 1401 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 CEMIPQ8WUJ3 1361 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 M0R2C6 588 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 NEMP1O14524 444 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 DVL2O14641 736 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 RNMTO43148 476 aaKnown RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 LAMTOR5O43504 91 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 B4GALT4O60513 344 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 BPIP17213 487 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 GJA4P35212 333 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 EIF4A1P60842 406 aaKnown RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 EXOSC10Q01780 885 aaKnown RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 STRN3Q13033 797 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 TOP3AQ13472 1001 aaPredicted RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 C4orf46Q504U0 113 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 CATSPEREQ5SY80 951 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 ANKRD45Q5TZF3 282 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 CCSAPQ6IQ19 270 aaPredicted RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 ZNF530Q6P9A1 599 aaPredicted RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 PLEKHH3Q7Z736 793 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 DEFB132Q7Z7B7 95 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 CHD1LQ86WJ1 897 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms