RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 B3GALT6Q96L58 329 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 APOL6Q9BWW8 343 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 MINDY3Q9H8M7 445 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 EPG5Q9HCE0 2579 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 CDH7Q9ULB5 785 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 PPME1Q9Y570 386 aa19.89■□□□□ 0.77
TSPAN3-208ENST00000560514 FAM170BA6NMN3 283 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 ASAP2O43150 1006 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 AXLP30530 894 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 RFC5P40937 340 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 QARSP47897 775 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 NPEPPSP55786 919 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 DSC1Q08554 894 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 SLC44A4Q53GD3 710 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 NOTUMQ6P988 496 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 PARM1Q6UWI2 310 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 GRASPQ7Z6J2 395 aaPredicted RBP19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 CCDC51Q96ER9 411 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 RPP25Q9BUL9 199 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 RNF26Q9BY78 433 aaPredicted RBP19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 OSBPL6Q9BZF3 934 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 ZSCAN32Q9NX65 697 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 USP18Q9UMW8 372 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 POLIQ9UNA4 740 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 SMG5Q9UPR3 1016 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 DOCK6Q96HP0 2047 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 PATJQ8NI35 1801 aa19.88■□□□□ 0.77
TSPAN3-208ENST00000560514 NCAM2O15394 837 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 EDIL3O43854 480 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 TADA2AO75478 443 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 TDP2O95551 362 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 EFEMP2O95967 443 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 RPL17P18621 184 aaKnown RBP19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 PCBP1Q15365 356 aaKnown RBP eCLIP19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 TSGA10IPQ3SY00 556 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 ZBTB41Q5SVQ8 909 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 LILRA6Q6PI73 481 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 RSPO2Q6UXX9 243 aaPredicted RBP19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 Q6ZUG5 572 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 ZFP42Q96MM3 310 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 RTKNQ9BST9 563 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 EIF2AQ9BY44 585 aaKnown RBP19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 GPR62Q9BZJ7 368 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 BMP2KQ9NSY1 1161 aaPredicted RBP19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 GMEB2Q9UKD1 530 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 ADAM28Q9UKQ2 775 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 GIT1Q9Y2X7 761 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 SPTBN2O15020 2390 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 GPR179Q6PRD1 2367 aa19.87■□□□□ 0.77
TSPAN3-208ENST00000560514 F8W810 466 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 HNRNPA1P09651 372 aaKnown RBP eCLIP19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 PPM1LQ5SGD2 360 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 B3GNT9Q6UX72 402 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 RASEFQ8IZ41 740 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 BRF1Q92994 677 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 DDX23Q9BUQ8 820 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 DHX33Q9H6R0 707 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 SH3GLB2Q9NR46 395 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 MIOSQ9NXC5 875 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 HES2Q9Y543 173 aa19.86■□□□□ 0.77
TSPAN3-208ENST00000560514 ACACBO00763 2458 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 CYP3A7-CYP3A51PA0A087WV96 503 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 XYLBO75191 536 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 P4HBP07237 508 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 CYP3A7P24462 503 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 OTUD6AQ7L8S5 288 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 ETNPPLQ8TBG4 499 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 FGF13Q92913 245 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 CPB2Q96IY4 423 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 NELL2Q99435 816 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 PHF20Q9BVI0 1012 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 CSRNP2Q9H175 543 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 LTB4R2Q9NPC1 389 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 DDX25Q9UHL0 483 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 PCDHA4Q9UN74 947 aa19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 MTF2Q9Y483 593 aaPredicted RBP19.85■□□□□ 0.77
TSPAN3-208ENST00000560514 SF3B1O75533 1304 aaKnown RBP eCLIP19.84■□□□□ 0.771e-6■■■■■ 66.8
TSPAN3-208ENST00000560514 INO80B-WBP1J3KQ70 363 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 TBC1D4O60343 1298 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 TSPAN1O60635 241 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 TFDP1Q14186 410 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 EMC2Q15006 297 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 MOXD1Q6UVY6 613 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 TRIM22Q8IYM9 498 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 ZBTB44Q8NCP5 570 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 MBOAT7Q96N66 472 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 MTRQ99707 1265 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 EPC1Q9H2F5 836 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 FBXW11Q9UKB1 542 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 RAB23Q9ULC3 237 aa19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 MRPS17Q9Y2R5 130 aaKnown RBP19.84■□□□□ 0.77
TSPAN3-208ENST00000560514 DCDC2BA2VCK2 349 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 EML1O00423 815 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 CCL16O15467 120 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 MARCH6O60337 910 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 C8AP07357 584 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms