RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 C2orf40Q9H1Z8 148 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 BHMT2Q9H2M3 363 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 FZD8Q9H461 694 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 MIOSQ9NXC5 875 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 MUTYHQ9UIF7 546 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 PP2D1A8MPX8 630 aa25.65■■□□□ 1.7
CRNDE-209ENST00000560208 BMP15O95972 392 aa25.65■■□□□ 1.7
CRNDE-209ENST00000560208 F13A1P00488 732 aa25.65■■□□□ 1.7
CRNDE-209ENST00000560208 PDIA4P13667 645 aaKnown RBP25.65■■□□□ 1.7
CRNDE-209ENST00000560208 FAM187BQ17R55 369 aa25.65■■□□□ 1.7
CRNDE-209ENST00000560208 SNX29Q8TEQ0 813 aa25.65■■□□□ 1.7
CRNDE-209ENST00000560208 RPGRIP1Q96KN7 1286 aa25.65■■□□□ 1.7
CRNDE-209ENST00000560208 DDX19AQ9NUU7 478 aaKnown RBP25.65■■□□□ 1.7
CRNDE-209ENST00000560208 PRG3Q9Y2Y8 225 aaPredicted RBP25.65■■□□□ 1.7
CRNDE-209ENST00000560208 PRR33A8MZF0 331 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 AKAP5P24588 427 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 CDC25AP30304 524 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 NAMPTP43490 491 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 OR1G1P47890 313 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 PPP2R5AQ15172 486 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 PTPN14Q15678 1187 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 HERC4Q5GLZ8 1057 aaPredicted RBP25.64■■□□□ 1.7
CRNDE-209ENST00000560208 USP28Q96RU2 1077 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 POLD4Q9HCU8 107 aa25.64■■□□□ 1.7
CRNDE-209ENST00000560208 DAXXQ9UER7 740 aaPredicted RBP25.64■■□□□ 1.7
CRNDE-209ENST00000560208 SSBP05455 408 aaKnown RBP eCLIP25.63■■□□□ 1.69
CRNDE-209ENST00000560208 DSC1Q08554 894 aa25.63■■□□□ 1.69
CRNDE-209ENST00000560208 ZRSR1Q15695 479 aaKnown RBP25.63■■□□□ 1.69
CRNDE-209ENST00000560208 MAPK6Q16659 721 aa25.63■■□□□ 1.69
CRNDE-209ENST00000560208 ARL6IP4Q66PJ3 421 aaKnown RBP25.63■■□□□ 1.69
CRNDE-209ENST00000560208 DEPTORQ8TB45 409 aa25.63■■□□□ 1.69
CRNDE-209ENST00000560208 MARCH5Q9NX47 278 aa25.63■■□□□ 1.69
CRNDE-209ENST00000560208 PARP2Q9UGN5 583 aa25.63■■□□□ 1.69
CRNDE-209ENST00000560208 TTLL13PA6NNM8 815 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 N4BP3O15049 544 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 EPCAMP16422 314 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 MARCKSP29966 332 aaPredicted RBP25.62■■□□□ 1.69
CRNDE-209ENST00000560208 PRPF4BQ13523 1007 aaKnown RBP25.62■■□□□ 1.69
CRNDE-209ENST00000560208 TMEM132AQ24JP5 1023 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 KRT79Q5XKE5 535 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 CES5AQ6NT32 575 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 GSTCDQ8NEC7 633 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 SLC22A17Q8WUG5 538 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 KIFAP3Q92845 792 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 IFT74Q96LB3 600 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 ZNF396Q96N95 335 aaPredicted RBP25.62■■□□□ 1.69
CRNDE-209ENST00000560208 CCDC113Q9H0I3 377 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 KLK14Q9P0G3 267 aa25.62■■□□□ 1.69
CRNDE-209ENST00000560208 NR1I2O75469 434 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 PRKCBP05771 671 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 LIG1P18858 919 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 ITIH3Q06033 890 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 PTPAQ15257 358 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 PPFIBP1Q86W92 1011 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 EMILIN2Q9BXX0 1053 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 ADAM7Q9H2U9 754 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 PDZD7Q9H5P4 517 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 MRPL17Q9NRX2 175 aaKnown RBP25.61■■□□□ 1.69
CRNDE-209ENST00000560208 DZANK1Q9NVP4 752 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 TFIP11Q9UBB9 837 aaKnown RBP25.61■■□□□ 1.69
CRNDE-209ENST00000560208 CDH22Q9UJ99 828 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 DNM3Q9UQ16 869 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 HCN4Q9Y3Q4 1203 aa25.61■■□□□ 1.69
CRNDE-209ENST00000560208 ZMYM2Q9UBW7 1377 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 ACKR2O00590 384 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 LILRB3O75022 631 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 SOD2P04179 222 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 GRIN1Q05586 938 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 RARS2Q5T160 578 aaKnown RBP25.6■■□□□ 1.69
CRNDE-209ENST00000560208 C12orf76Q8N812 135 aaPredicted RBP25.6■■□□□ 1.69
CRNDE-209ENST00000560208 KLHL5Q96PQ7 755 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 KIFC3Q9BVG8 833 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 HERC2P3Q9BVR0 1158 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 COLEC11Q9BWP8 271 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 USP20Q9Y2K6 914 aa25.6■■□□□ 1.69
CRNDE-209ENST00000560208 E9PMD0 336 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 CNPP09543 421 aaKnown RBP25.59■■□□□ 1.69
CRNDE-209ENST00000560208 KLRC2P26717 231 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 EFNA5P52803 228 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 GRIK3Q13003 919 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 TAS1R1Q7RTX1 841 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 RPS6KC1Q96S38 1066 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 ADPGKQ9BRR6 497 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 TECTAO75443 2155 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 MYO10Q9HD67 2058 aa25.59■■□□□ 1.69
CRNDE-209ENST00000560208 F8W810 466 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 C2CD2LO14523 706 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 EFEMP2O95967 443 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 EDN1P05305 212 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 URODP06132 367 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 STK38Q15208 465 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 EDAQ92838 391 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 NECTIN4Q96NY8 510 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 PLIN2Q99541 437 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 MMTAG2Q9BU76 263 aaKnown RBP25.58■■□□□ 1.69
CRNDE-209ENST00000560208 SNTG2Q9NY99 539 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 SSX2IPQ9Y2D8 614 aa25.58■■□□□ 1.69
CRNDE-209ENST00000560208 TRIP11Q15643 1979 aa25.57■■□□□ 1.68
CRNDE-209ENST00000560208 BRD1O95696 1058 aa25.57■■□□□ 1.68
CRNDE-209ENST00000560208 ANP32AP39687 249 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms