RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 DSC1Q08554 894 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 GNL2Q13823 731 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 ECM1Q16610 540 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 TTC38Q5R3I4 469 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 SLC27A1Q6PCB7 646 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 SUGP1Q8IWZ8 645 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 FBXL6Q8N531 539 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 GSTCDQ8NEC7 633 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 CCDC51Q96ER9 411 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 KIF2CQ99661 725 aa22.71■■□□□ 1.23
TSPAN3-206ENST00000559373 CARNS1A5YM72 827 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 EDN1P05305 212 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 URODP06132 367 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 XRCC6P12956 609 aaKnown RBP eCLIP22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 PPFIBP1Q86W92 1011 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 FAM184AQ8NB25 1140 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 NACC1Q96RE7 527 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 PAAF1Q9BRP4 392 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 POLR3CQ9BUI4 534 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 HERC2P3Q9BVR0 1158 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 GPR62Q9BZJ7 368 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 GIT1Q9Y2X7 761 aa22.7■■□□□ 1.22
TSPAN3-206ENST00000559373 PIEZO1Q92508 2521 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 A0A1B0GUA9 196 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 TEX28O15482 410 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 TMEM132AQ24JP5 1023 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 PADI6Q6TGC4 694 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 TDRD5Q8NAT2 981 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 FBXO18Q8NFZ0 1043 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 HASPINQ8TF76 798 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 RPS6KC1Q96S38 1066 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 KIFC3Q9BVG8 833 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 NFKBIZQ9BYH8 718 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 FOXP1Q9H334 677 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 SFXN1Q9H9B4 322 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 MAN1C1Q9NR34 630 aa22.69■■□□□ 1.22
TSPAN3-206ENST00000559373 ARHGEF35A5YM69 484 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 INPPL1O15357 1258 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 RPA1P27694 616 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 GLUD2P49448 558 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 MRE11P49959 708 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 KIAA0319Q5VV43 1072 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 GPR149Q86SP6 731 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 PALB2Q86YC2 1186 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 NOSTRINQ8IVI9 506 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 LLPHQ9BRT6 129 aaKnown RBP22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 SNTG2Q9NY99 539 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 SORCS3Q9UPU3 1222 aa22.68■■□□□ 1.22
TSPAN3-206ENST00000559373 RFPL2O75678 378 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 RPL17P18621 184 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 CCT6AP40227 531 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 ZBTB8OSQ8IWT0 167 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 HACE1Q8IYU2 909 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 C4orf32Q8N8J7 132 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 MCPH1Q8NEM0 835 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 ERMNQ8TAM6 284 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 COLEC11Q9BWP8 271 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 PDZD7Q9H5P4 517 aa22.67■■□□□ 1.22
TSPAN3-206ENST00000559373 PDCD11Q14690 1871 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 CCDC195A0A1B0GUA6 201 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 CASTOR2A6NHX0 329 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 EIF5BO60841 1220 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 EFEMP2O95967 443 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 RBM25P49756 843 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 MTMR3Q13615 1198 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 C8orf34Q49A92 452 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 EEF1DP3Q658K8 133 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 CDCA2Q69YH5 1023 aaPredicted RBP22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 FUT10Q6P4F1 479 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 RNF168Q8IYW5 571 aaPredicted RBP22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 KCNH6Q9H252 994 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 FZD8Q9H461 694 aa22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 PRMT7Q9NVM4 692 aaPredicted RBP22.66■■□□□ 1.22
TSPAN3-206ENST00000559373 MYH15Q9Y2K3 1946 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 PP2D1A8MPX8 630 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 NR1I2O75469 434 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 PRKCBP05771 671 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 ADH1AP07327 375 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 CYP11B2P19099 503 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 AVPR2P30518 371 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 TOB1P50616 345 aaPredicted RBP22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 TCF15Q12870 199 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 PRPF4BQ13523 1007 aaKnown RBP22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 PRSS55Q6UWB4 352 aaPredicted RBP22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 DEPTORQ8TB45 409 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 RIN2Q8WYP3 895 aaPredicted RBP22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 ZSCAN31Q96LW9 406 aaPredicted RBP22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 BHMT2Q9H2M3 363 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 FAM86C1Q9NVL1 165 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 ADAM28Q9UKQ2 775 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 KIAA1024Q9UPX6 916 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 GDAQ9Y2T3 454 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 PCDHB6Q9Y5E3 794 aa22.65■■□□□ 1.22
TSPAN3-206ENST00000559373 TADA2AO75478 443 aa22.64■■□□□ 1.21
TSPAN3-206ENST00000559373 CDC25AP30304 524 aa22.64■■□□□ 1.21
TSPAN3-206ENST00000559373 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.21
TSPAN3-206ENST00000559373 DSG1Q02413 1049 aa22.64■■□□□ 1.21
TSPAN3-206ENST00000559373 GRIK3Q13003 919 aa22.64■■□□□ 1.21
TSPAN3-206ENST00000559373 PPP4R3CPQ6ZMV5 832 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms