RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRPM1-210ENST00000559179 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
TRPM1-210ENST00000559179 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRPM1-210ENST00000559179 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
TRPM1-210ENST00000559179 WRAP73Q9P2S5 460 aaPredicted RBP13.72□□□□□ -0.21
TRPM1-210ENST00000559179 POLIQ9UNA4 740 aa13.72□□□□□ -0.21
TRPM1-210ENST00000559179 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
TRPM1-210ENST00000559179 ZFHX2Q9C0A1 2572 aaPredicted RBP13.72□□□□□ -0.21
TRPM1-210ENST00000559179 ZBTB39O15060 712 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 LMNAP02545 664 aaKnown RBP13.71□□□□□ -0.21
TRPM1-210ENST00000559179 DCNP07585 359 aaKnown RBP13.71□□□□□ -0.21
TRPM1-210ENST00000559179 SRFP11831 508 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 PTENP60484 403 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 DSG1Q02413 1049 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 CREMQ03060 361 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 FUT10Q6P4F1 479 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
TRPM1-210ENST00000559179 CEP57Q86XR8 500 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 HDAC7Q8WUI4 952 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 PHF20Q9BVI0 1012 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 RXFP1Q9HBX9 757 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 BRMS1Q9HCU9 246 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 KCNMB3Q9NPA1 279 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 SIT1Q9Y3P8 196 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 R4GN57 208 aa13.71□□□□□ -0.21
TRPM1-210ENST00000559179 KRBA1A5PL33 1030 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 F8W810 466 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 TGM5O43548 720 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
TRPM1-210ENST00000559179 LAMP2P13473 410 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 RPL17P18621 184 aaKnown RBP13.7□□□□□ -0.22
TRPM1-210ENST00000559179 FSHRP23945 695 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 ZC3H14Q6PJT7 736 aaKnown RBP13.7□□□□□ -0.22
TRPM1-210ENST00000559179 MAEAQ7L5Y9 396 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 WASF1Q92558 559 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 HAS1Q92839 578 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
TRPM1-210ENST00000559179 GPR62Q9BZJ7 368 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
TRPM1-210ENST00000559179 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 ZDHHC7Q9NXF8 308 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 ADAM28Q9UKQ2 775 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 PCDHA12Q9UN75 941 aa13.7□□□□□ -0.22
TRPM1-210ENST00000559179 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 DTNBO60941 627 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 DGAT1O75907 488 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
TRPM1-210ENST00000559179 LIG1P18858 919 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 DSC1Q08554 894 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 GRIK3Q13003 919 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 NPY5RQ15761 445 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 CALCRLQ16602 461 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
TRPM1-210ENST00000559179 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 HASPINQ8TF76 798 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 SHDQ96IW2 340 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 NUMBLQ9Y6R0 609 aa13.69□□□□□ -0.22
TRPM1-210ENST00000559179 SF3B1O75533 1304 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 B4GALT5O43286 388 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 USO1O60763 962 aaKnown RBP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 ZMYND10O75800 440 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 SLITRK3O94933 977 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 KRT2P35908 639 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 TXKP42681 527 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 MBTD1Q05BQ5 628 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 SCRN1Q12765 414 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 CAPSQ13938 189 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 FAM171A1Q5VUB5 890 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 GRASPQ7Z6J2 395 aaPredicted RBP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 ASAP3Q8TDY4 903 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 CHST7Q9NS84 486 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 ANKEF1Q9NU02 776 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 FNIP2Q9P278 1114 aa13.68□□□□□ -0.22
TRPM1-210ENST00000559179 ORC3Q9UBD5 711 aaPredicted RBP13.68□□□□□ -0.22
TRPM1-210ENST00000559179 A0A087WWV3 80 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 CASTOR2A6NHX0 329 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 FOSBP53539 338 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 POU5F1BQ06416 359 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 TRIM29Q14134 588 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 RNF168Q8IYW5 571 aaPredicted RBP13.67□□□□□ -0.22
TRPM1-210ENST00000559179 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 RHOBTB2Q9BYZ6 727 aa13.67□□□□□ -0.22
TRPM1-210ENST00000559179 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms